Guide to the Human Genome
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Name: DLGAP4 Sequence: fasta or formatted (989aa) NCBI GI: 34335253
Description:

disks large-associated protein 4 isoform a

Referenced in:

Synapses

Other entries for this name:
alt prot [285aa] disks large-associated protein 4 isoform c
alt prot [453aa] disks large-associated protein 4 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         81           3
 C cysteine            1.6         16           2
 D aspartate           5.5         54           2
 E glutamate           6.8         67           2
 F phenylalanine       2.3         23           2
 G glycine             6.2         61           4
 H histidine           2.3         23           1
 I isoleucine          2.4         24           1
 K lysine              5.6         55           2
 L leucine             8.6         85           2
 M methionine          1.3         13           1
 N asparagine          3.1         31           2
 P proline             9.5         94           5
 Q glutamine           5.0         49           2
 R arginine            6.5         64           2
 S serine             13.9        137           4
 T threonine           5.5         54           2
 V valine              2.9         29           1
 W tryptophan          1.0         10           2
 Y tyrosine            1.9         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   disks large-associated protein 4 isoform a 
DLGAP4                0.399   disks large-associated protein 4 isoform b 
DLGAP1                0.392   discs large homolog-associated protein 1 isoform alp...
DLGAP2                0.330   discs large-associated protein 2 
DLGAP4                0.280   disks large-associated protein 4 isoform c 
DLGAP1                0.269   discs large homolog-associated protein 1 isoform bet...
DLGAP3                0.241   discs, large (Drosophila) homolog-associated protei...
DLGAP5                0.029   discs large homolog 7 isoform b 
DLGAP5                0.029   discs large homolog 7 isoform a 
TNRC18                0.015   trinucleotide repeat containing 18 
DSPP                  0.015   dentin sialophosphoprotein preproprotein 
SRRM1                 0.013   serine/arginine repetitive matrix 1 
SRRM2                 0.012   splicing coactivator subunit SRm300 
NOLC1                 0.012   nucleolar and coiled-body phosphoprotein 1 
FNDC1                 0.011   fibronectin type III domain containing 1 
MLL2                  0.011   myeloid/lymphoid or mixed-lineage leukemia 2 
TAF3                  0.010   RNA polymerase II transcription factor TAFII140 [Ho...
ACIN1                 0.010   apoptotic chromatin condensation inducer 1 
YLPM1                 0.010   YLP motif containing 1 
ABI3BP                0.010   ABI gene family, member 3 (NESH) binding protein [Ho...
SEC24B                0.010   SEC24 (S. cerevisiae) homolog B isoform b 
WIPF1                 0.010   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.010   WAS/WASL interacting protein family, member 1 
MUC12                 0.009   PREDICTED: mucin 12 
MLLT1                 0.009   myeloid/lymphoid or mixed-lineage leukemia (trithora...
AFF1                  0.009   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
MUC21                 0.009   mucin 21 
LOC100133756          0.009   PREDICTED: hypothetical protein, partial 
DMP1                  0.009   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
NAP5                  0.009   Nck-associated protein 5 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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