Guide to the Human Genome
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Name: DLGAP4 Sequence: fasta or formatted (453aa) NCBI GI: 34335251
Description:

disks large-associated protein 4 isoform b

Referenced in:

Synapses

Other entries for this name:
alt prot [285aa] disks large-associated protein 4 isoform c
alt prot [989aa] disks large-associated protein 4 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         39           2
 C cysteine            2.2         10           2
 D aspartate           6.4         29           2
 E glutamate           7.3         33           2
 F phenylalanine       1.5          7           1
 G glycine             3.3         15           2
 H histidine           1.3          6           1
 I isoleucine          2.9         13           1
 K lysine              7.3         33           2
 L leucine             8.2         37           2
 M methionine          1.1          5           1
 N asparagine          2.6         12           2
 P proline            10.2         46           4
 Q glutamine           6.2         28           2
 R arginine            5.1         23           2
 S serine             13.9         63           4
 T threonine           4.9         22           2
 V valine              4.4         20           1
 W tryptophan          1.3          6           1
 Y tyrosine            1.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   disks large-associated protein 4 isoform b 
DLGAP4                0.889   disks large-associated protein 4 isoform a 
DLGAP4                0.623   disks large-associated protein 4 isoform c 
DLGAP1                0.451   discs large homolog-associated protein 1 isoform alp...
DLGAP1                0.451   discs large homolog-associated protein 1 isoform bet...
DLGAP2                0.415   discs large-associated protein 2 
DLGAP3                0.323   discs, large (Drosophila) homolog-associated protei...
DLGAP5                0.065   discs large homolog 7 isoform b 
DLGAP5                0.065   discs large homolog 7 isoform a 
SRRM2                 0.026   splicing coactivator subunit SRm300 
NOLC1                 0.023   nucleolar and coiled-body phosphoprotein 1 
TNRC18                0.020   trinucleotide repeat containing 18 
MLLT1                 0.020   myeloid/lymphoid or mixed-lineage leukemia (trithora...
DSPP                  0.019   dentin sialophosphoprotein preproprotein 
MLL2                  0.019   myeloid/lymphoid or mixed-lineage leukemia 2 
CASKIN1               0.018   CASK interacting protein 1 
PRG4                  0.018   proteoglycan 4 isoform D 
PRG4                  0.018   proteoglycan 4 isoform C 
PRG4                  0.018   proteoglycan 4 isoform B 
PRG4                  0.018   proteoglycan 4 isoform A 
AFF1                  0.018   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
GON4L                 0.017   gon-4-like isoform a 
RAPH1                 0.017   Ras association and pleckstrin homology domains 1 is...
WNK2                  0.017   WNK lysine deficient protein kinase 2 
C9orf86               0.016   Rab-like GTP-binding protein 1 isoform 1 
MYO9B                 0.016   myosin IXB isoform 2 
MYO9B                 0.016   myosin IXB isoform 1 
NAF1                  0.016   nuclear assembly factor 1 homolog isoform b 
NAF1                  0.016   nuclear assembly factor 1 homolog isoform a 
YLPM1                 0.016   YLP motif containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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