Guide to the Human Genome
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Name: DLGAP1 Sequence: fasta or formatted (675aa) NCBI GI: 51339031
Description:

discs large homolog-associated protein 1 isoform beta

Referenced in:

Synapses

Other entries for this name:
alt prot [977aa] discs large homolog-associated protein 1 isoform alpha
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         51           2
 C cysteine            1.9         13           1
 D aspartate           6.5         44           3
 E glutamate           7.7         52           3
 F phenylalanine       3.0         20           1
 G glycine             4.1         28           1
 H histidine           2.1         14           1
 I isoleucine          5.0         34           2
 K lysine              5.3         36           2
 L leucine             6.5         44           2
 M methionine          2.8         19           1
 N asparagine          3.9         26           2
 P proline             6.7         45           3
 Q glutamine           5.3         36           2
 R arginine            6.8         46           2
 S serine             11.1         75           3
 T threonine           7.0         47           5
 V valine              4.1         28           1
 W tryptophan          0.9          6           1
 Y tyrosine            1.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   discs large homolog-associated protein 1 isoform bet... 
DLGAP1                0.974   discs large homolog-associated protein 1 isoform alp...
DLGAP2                0.470   discs large-associated protein 2 
DLGAP4                0.400   disks large-associated protein 4 isoform a 
DLGAP3                0.339   discs, large (Drosophila) homolog-associated protei...
DLGAP4                0.301   disks large-associated protein 4 isoform b 
DLGAP4                0.214   disks large-associated protein 4 isoform c 
DLGAP5                0.042   discs large homolog 7 isoform b 
DLGAP5                0.042   discs large homolog 7 isoform a 
LOC100131251          0.011   PREDICTED: hypothetical protein 
LOC100131251          0.011   PREDICTED: hypothetical protein 
SH3PXD2A              0.011   SH3 multiple domains 1 
KIAA1522              0.011   hypothetical protein LOC57648 
RICS                  0.010   Rho GTPase-activating protein isoform 1 
RICS                  0.010   Rho GTPase-activating protein isoform 2 
LOC100294501          0.009   PREDICTED: hypothetical protein 
MUC16                 0.009   mucin 16 
LOC729792             0.009   PREDICTED: hypothetical protein 
LOC729792             0.009   PREDICTED: hypothetical protein 
LOC729792             0.009   PREDICTED: hypothetical protein 
LOC100294249          0.009   PREDICTED: hypothetical protein XP_002344067 
LOC100294238          0.009   PREDICTED: hypothetical protein 
LOC100294204          0.009   PREDICTED: hypothetical protein 
LOC100294136          0.009   PREDICTED: hypothetical protein 
LOC100294091          0.009   PREDICTED: hypothetical protein 
LOC730401             0.009   PREDICTED: hypothetical protein 
MUC5AC                0.009   mucin 5AC 
MUC5B                 0.009   mucin 5, subtype B, tracheobronchial 
MYST3                 0.009   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.009   MYST histone acetyltransferase (monocytic leukemia)...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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