Guide to the Human Genome
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Name: DLGAP2 Sequence: fasta or formatted (975aa) NCBI GI: 38202224
Description:

discs large-associated protein 2

Referenced in:

Synapses

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         70           3
 C cysteine            2.1         20           1
 D aspartate           6.3         61           2
 E glutamate           6.7         65           2
 F phenylalanine       2.2         21           1
 G glycine             5.0         49           2
 H histidine           3.7         36           3
 I isoleucine          2.7         26           1
 K lysine              5.4         53           2
 L leucine             7.7         75           2
 M methionine          2.5         24           2
 N asparagine          2.3         22           2
 P proline             7.6         74           3
 Q glutamine           5.3         52           2
 R arginine            7.4         72           3
 S serine             12.7        124           3
 T threonine           5.4         53           2
 V valine              4.0         39           2
 W tryptophan          1.1         11           2
 Y tyrosine            2.9         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   discs large-associated protein 2 
DLGAP1                0.458   discs large homolog-associated protein 1 isoform alp...
DLGAP3                0.400   discs, large (Drosophila) homolog-associated protei...
DLGAP4                0.332   disks large-associated protein 4 isoform a 
DLGAP1                0.318   discs large homolog-associated protein 1 isoform bet...
DLGAP4                0.187   disks large-associated protein 4 isoform b 
DLGAP4                0.147   disks large-associated protein 4 isoform c 
DLGAP5                0.028   discs large homolog 7 isoform b 
DLGAP5                0.028   discs large homolog 7 isoform a 
MUC16                 0.008   mucin 16 
MUC3A                 0.007   PREDICTED: mucin 3A, cell surface associated, parti...
PRPF38A               0.007   PRP38 pre-mRNA processing factor 38 (yeast) domain c...
TOPORS                0.006   topoisomerase I binding, arginine/serine-rich 
IRX4                  0.006   iroquois homeobox 4 
NKTR                  0.006   natural killer-tumor recognition sequence 
DSPP                  0.005   dentin sialophosphoprotein preproprotein 
CEP170                0.005   centrosomal protein 170kDa isoform beta 
CEP170                0.005   centrosomal protein 170kDa isoform alpha 
CEP170                0.005   centrosomal protein 170kDa isoform gamma 
CEP164                0.005   centrosomal protein 164kDa 
MAGEC1                0.005   melanoma antigen family C, 1 
RBM15B                0.005   RNA binding motif protein 15B 
CACNA1A               0.005   calcium channel, alpha 1A subunit isoform 4 
CACNA1A               0.005   calcium channel, alpha 1A subunit isoform 3 
SGSM1                 0.005   RUN and TBC1 domain containing 2 isoform 3 
SGSM1                 0.005   RUN and TBC1 domain containing 2 isoform 1 
PTPRC                 0.005   protein tyrosine phosphatase, receptor type, C isofo...
CHEK2                 0.005   protein kinase CHK2 isoform b 
CHEK2                 0.005   protein kinase CHK2 isoform a 
MUC4                  0.005   mucin 4 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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