Guide to the Human Genome
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Name: NAF1 Sequence: fasta or formatted (494aa) NCBI GI: 193083157
Description:

nuclear assembly factor 1 homolog isoform a

Referenced in:

Nucleus and Nucleolus

Other entries for this name:
alt prot [389aa] nuclear assembly factor 1 homolog isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         33           4
 C cysteine            0.8          4           1
 D aspartate           5.7         28           3
 E glutamate           8.1         40           2
 F phenylalanine       4.7         23           1
 G glycine             5.5         27           1
 H histidine           2.2         11           1
 I isoleucine          3.6         18           2
 K lysine              5.3         26           2
 L leucine             6.3         31           3
 M methionine          2.0         10           1
 N asparagine          4.3         21           2
 P proline            14.4         71           9
 Q glutamine           4.7         23           1
 R arginine            2.8         14           1
 S serine             12.3         61          18
 T threonine           3.8         19           1
 V valine              4.3         21           2
 W tryptophan          0.6          3           1
 Y tyrosine            2.0         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear assembly factor 1 homolog isoform a 
NAF1                  0.662   nuclear assembly factor 1 homolog isoform b 
PCLO                  0.040   piccolo isoform 2 
PCLO                  0.040   piccolo isoform 1 
WASF2                 0.036   WAS protein family, member 2 
ZFHX4                 0.034   zinc finger homeodomain 4 
SRRM2                 0.033   splicing coactivator subunit SRm300 
PRR12                 0.032   proline rich 12 
SETD1B                0.031   SET domain containing 1B 
FMN1                  0.030   formin 1 
ZNF341                0.030   zinc finger protein 341 
YLPM1                 0.030   YLP motif containing 1 
HTT                   0.029   huntingtin 
FMNL2                 0.029   formin-like 2 
WASF1                 0.029   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.029   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.029   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.029   Wiskott-Aldrich syndrome protein family member 1 [Hom...
WAS                   0.029   Wiskott-Aldrich syndrome protein 
FMNL1                 0.028   formin-like 1 
ENAH                  0.027   enabled homolog isoform a 
ENAH                  0.027   enabled homolog isoform b 
TNRC18                0.027   trinucleotide repeat containing 18 
FHDC1                 0.027   FH2 domain containing 1 
ASXL3                 0.027   additional sex combs like 3 
SETD1A                0.025   SET domain containing 1A 
DSPP                  0.025   dentin sialophosphoprotein preproprotein 
CBLL1                 0.025   Cas-Br-M (murine) ecotropic retroviral transforming...
FASLG                 0.025   fas ligand 
EIF3B                 0.025   eukaryotic translation initiation factor 3, subunit ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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