C9orf86 9942

Name: C9orf86	Sequence: fasta or formatted (729aa)		NCBI GI: 186700623
Description: Rab-like GTP-binding protein 1 isoform 1		Not currently referenced in the text
Other entries for this name: alt prot {520aa} Rab-like GTP-binding protein 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 60 2 C cysteine 0.7 5 1 D aspartate 7.1 52 2 E glutamate 9.1 66 4 F phenylalanine 3.2 23 2 G glycine 7.7 56 3 H histidine 1.1 8 1 I isoleucine 2.5 18 2 K lysine 7.0 51 7 L leucine 6.3 46 2 M methionine 2.2 16 2 N asparagine 2.5 18 1 P proline 11.7 85 5 Q glutamine 4.7 34 2 R arginine 6.0 44 4 S serine 8.1 59 3 T threonine 4.4 32 2 V valine 5.3 39 2 W tryptophan 0.8 6 1 Y tyrosine 1.5 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Rab-like GTP-binding protein 1 isoform 1 C9orf86 0.486 Rab-like GTP-binding protein 1 isoform 2 NEFH 0.038 neurofilament, heavy polypeptide 200kDa SCAF1 0.036 SR-related CTD-associated factor 1 PRG4 0.031 proteoglycan 4 isoform D PRG4 0.031 proteoglycan 4 isoform C PRG4 0.031 proteoglycan 4 isoform B PRG4 0.031 proteoglycan 4 isoform A C2orf55 0.030 hypothetical protein LOC343990 C6orf132 0.030 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.030 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.030 PREDICTED: hypothetical protein LOC647024 CIC 0.029 capicua homolog FSCB 0.029 fibrous sheath CABYR binding protein NACA 0.028 nascent polypeptide-associated complex alpha subuni... BAT2D1 0.027 HBxAg transactivated protein 2 PRR12 0.027 proline rich 12 SETD1A 0.027 SET domain containing 1A WIPF1 0.027 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.027 WAS/WASL interacting protein family, member 1 SRRM2 0.027 splicing coactivator subunit SRm300 MAP7D1 0.027 MAP7 domain containing 1 FLJ22184 0.027 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.027 PREDICTED: hypothetical protein LOC80164 RAPH1 0.027 Ras association and pleckstrin homology domains 1 is... SRCAP 0.027 Snf2-related CBP activator protein PRB2 0.027 proline-rich protein BstNI subfamily 2 KIAA0754 0.025 hypothetical protein LOC643314 MLL2 0.025 myeloid/lymphoid or mixed-lineage leukemia 2 TET3 0.025 tet oncogene family member 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.