Guide to the Human Genome
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Name: MYO9B Sequence: fasta or formatted (2157aa) NCBI GI: 33356170
Description:

myosin IXB isoform 1

Referenced in:

Myosin
Rho and Rac

Other entries for this name:
alt prot [2022aa] myosin IXB isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6        165           3
 C cysteine            1.3         28           1
 D aspartate           3.9         84           2
 E glutamate           9.1        197           3
 F phenylalanine       3.0         65           2
 G glycine             5.5        119           2
 H histidine           2.5         53           1
 I isoleucine          4.2         91           2
 K lysine              7.8        168           4
 L leucine            10.6        228           3
 M methionine          1.6         35           1
 N asparagine          2.9         63           3
 P proline             5.9        128           2
 Q glutamine           5.6        121           2
 R arginine            6.7        144           3
 S serine              7.5        162           2
 T threonine           4.8        104           2
 V valine              5.6        121           2
 W tryptophan          0.7         16           1
 Y tyrosine            3.0         65           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin IXB isoform 1 
MYO9B                 0.932   myosin IXB isoform 2 
MYO9A                 0.279   myosin IXA 
MYO15A                0.100   myosin XV 
MYO7A                 0.097   myosin VIIA isoform 2 
MYO7A                 0.097   myosin VIIA isoform 3 
MYO7A                 0.097   myosin VIIA isoform 1 
MYO7B                 0.097   myosin VIIB 
MYO10                 0.096   myosin X 
MYO3B                 0.089   myosin IIIB isoform 1 
MYO3B                 0.089   myosin IIIB isoform 2 
MYO3A                 0.088   myosin IIIA 
MYO5B                 0.087   myosin VB 
MYO5A                 0.084   myosin VA isoform 2 
MYO5A                 0.084   myosin VA isoform 1 
MYO5C                 0.083   myosin VC 
MYO6                  0.080   myosin VI 
MYO1F                 0.080   myosin IF 
MYO1B                 0.079   myosin IB isoform 1 
MYO1B                 0.079   myosin IB isoform 2 
MYO1B                 0.079   myosin IB isoform 1 
MYH9                  0.079   myosin, heavy polypeptide 9, non-muscle 
MYH11                 0.077   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.077   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH10                 0.077   myosin, heavy polypeptide 10, non-muscle 
MYH11                 0.077   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.077   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYO1A                 0.077   myosin IA 
MYO1E                 0.076   myosin IE 
MYO1C                 0.074   myosin IC isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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