Guide to the Human Genome
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Name: GON4L Sequence: fasta or formatted (2240aa) NCBI GI: 82830424
Description:

gon-4-like isoform a

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [1529aa] gon-4-like isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3        141           2
 C cysteine            1.6         35           2
 D aspartate           5.5        124           5
 E glutamate          11.7        263           7
 F phenylalanine       2.7         61           2
 G glycine             5.2        116           3
 H histidine           2.3         51           2
 I isoleucine          3.2         72           2
 K lysine              7.0        156           4
 L leucine             8.5        191           4
 M methionine          2.3         52           2
 N asparagine          3.2         71           2
 P proline             8.6        193           5
 Q glutamine           5.2        116           3
 R arginine            4.7        105           3
 S serine              8.8        197           3
 T threonine           6.0        134           3
 V valine              5.7        127           2
 W tryptophan          0.8         17           1
 Y tyrosine            0.8         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gon-4-like isoform a 
GON4L                 0.663   gon-4-like isoform b 
YY1AP1                0.308   YY1-associated protein isoform 3 
YY1AP1                0.299   YY1-associated protein isoform 2 
RP1L1                 0.011   retinitis pigmentosa 1-like 1 
RPGR                  0.010   retinitis pigmentosa GTPase regulator isoform C [Hom...
SRCAP                 0.010   Snf2-related CBP activator protein 
NCL                   0.009   nucleolin 
CEP164                0.008   centrosomal protein 164kDa 
CASP8AP2              0.008   caspase 8 associated protein 2 
CASP8AP2              0.008   caspase 8 associated protein 2 
CASP8AP2              0.008   caspase 8 associated protein 2 
NEFH                  0.008   neurofilament, heavy polypeptide 200kDa 
YTHDC1                0.008   splicing factor YT521-B isoform 2 
YTHDC1                0.008   splicing factor YT521-B isoform 1 
NEFM                  0.007   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.007   neurofilament, medium polypeptide 150kDa isoform 2 ...
PELP1                 0.007   proline, glutamic acid and leucine rich protein 1 [...
TTBK1                 0.007   tau tubulin kinase 1 
SETD1B                0.007   SET domain containing 1B 
PCDH15                0.007   protocadherin 15 isoform CD2-1 precursor 
MAP1B                 0.007   microtubule-associated protein 1B 
PHF14                 0.007   PHD finger protein 14 isoform 2 
PHF14                 0.007   PHD finger protein 14 isoform 1 
FLJ22184              0.007   PREDICTED: hypothetical protein FLJ22184 
EIF5B                 0.007   eukaryotic translation initiation factor 5B 
SMTNL1                0.007   smoothelin-like 1 
MDC1                  0.007   mediator of DNA-damage checkpoint 1 
MYT1                  0.006   myelin transcription factor 1 
ACRC                  0.006   ACRC protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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