KIAA1539 26248

Name: KIAA1539	Sequence: fasta or formatted (538aa)		NCBI GI: 33636717
Description: hypothetical protein LOC80256		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 37 2 C cysteine 1.3 7 1 D aspartate 2.6 14 1 E glutamate 5.4 29 3 F phenylalanine 3.2 17 2 G glycine 11.9 64 2 H histidine 3.5 19 1 I isoleucine 1.1 6 1 K lysine 2.2 12 1 L leucine 11.0 59 2 M methionine 1.1 6 1 N asparagine 2.4 13 1 P proline 13.8 74 2 Q glutamine 3.0 16 1 R arginine 7.1 38 4 S serine 10.2 55 2 T threonine 5.6 30 1 V valine 5.6 30 2 W tryptophan 0.9 5 1 Y tyrosine 1.3 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC80256 KIAA1370 0.206 hypothetical protein LOC56204 COL18A1 0.034 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.034 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.034 alpha 1 type XVIII collagen isoform 1 precursor [Ho... COL4A4 0.029 alpha 4 type IV collagen precursor TAF4 0.029 TBP-associated factor 4 COL3A1 0.027 collagen type III alpha 1 preproprotein COL5A1 0.027 alpha 1 type V collagen preproprotein COL7A1 0.026 alpha 1 type VII collagen precursor KIAA1522 0.025 hypothetical protein LOC57648 NACA 0.025 nascent polypeptide-associated complex alpha subuni... COL1A2 0.025 alpha 2 type I collagen COL9A1 0.025 alpha 1 type IX collagen isoform 1 precursor COL9A1 0.025 alpha 1 type IX collagen isoform 2 precursor COL11A1 0.024 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.024 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.024 alpha 1 type XI collagen isoform A preproprotein [Ho... COL4A5 0.024 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.024 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.024 type IV collagen alpha 5 isoform 3 precursor COL10A1 0.024 type X collagen alpha 1 precursor OGFR 0.024 opioid growth factor receptor COL5A2 0.024 alpha 2 type V collagen preproprotein COL11A2 0.024 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.024 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.024 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL17A1 0.023 alpha 1 type XVII collagen FLJ37078 0.023 hypothetical protein LOC222183 COL5A3 0.023 collagen, type V, alpha 3 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.