WDR16 2685

Name: WDR16	Sequence: fasta or formatted (620aa)		NCBI GI: 124028512
Description: WD40-repeat protein upregulated in HCC isoform b		Referenced in: WD Repeat Proteins
Other entries for this name: alt prot [552aa] WD40-repeat protein upregulated in HCC isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 36 2 C cysteine 2.9 18 1 D aspartate 5.5 34 4 E glutamate 5.5 34 2 F phenylalanine 3.9 24 2 G glycine 9.8 61 3 H histidine 2.7 17 1 I isoleucine 8.4 52 2 K lysine 5.2 32 2 L leucine 7.7 48 2 M methionine 2.1 13 1 N asparagine 4.5 28 2 P proline 3.1 19 1 Q glutamine 3.1 19 1 R arginine 5.2 32 2 S serine 6.5 40 2 T threonine 6.8 42 3 V valine 7.4 46 3 W tryptophan 1.8 11 1 Y tyrosine 2.3 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 WD40-repeat protein upregulated in HCC isoform b [H... WDR16 0.851 WD40-repeat protein upregulated in HCC isoform c [H... WDR90 0.070 WD repeat domain 90 WDR51A 0.056 WD repeat domain 51A isoform 2 WDR51A 0.056 WD repeat domain 51A isoform 1 WDR51A 0.049 WD repeat domain 51A isoform 3 WDR62 0.046 WD repeat domain 62 isoform 1 WDR62 0.046 WD repeat domain 62 isoform 2 MAPKBP1 0.044 mitogen-activated protein kinase binding protein 1 ... MAPKBP1 0.044 mitogen-activated protein kinase binding protein 1 ... EML5 0.042 echinoderm microtubule associated protein like 5 [Ho... WDR51B 0.042 WD repeat domain 51B EML6 0.040 echinoderm microtubule associated protein like 6 [H... WDR5 0.039 WD repeat domain 5 WDR5 0.039 WD repeat domain 5 ATG16L1 0.036 APG16 autophagy 16-like isoform 1 ATG16L1 0.036 APG16 autophagy 16-like isoform 2 SMU1 0.035 smu-1 suppressor of mec-8 and unc-52 homolog FBXW7 0.035 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.035 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.035 F-box and WD repeat domain containing 7 isoform 2 [H... TAF5L 0.035 PCAF associated factor 65 beta isoform a WDR5B 0.035 WD repeat domain 5B KATNB1 0.035 katanin p80 subunit B 1 PRPF19 0.035 PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom... BTRC 0.035 beta-transducin repeat containing protein isoform 2 [... BTRC 0.035 beta-transducin repeat containing protein isoform 1 ... PLRG1 0.035 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... FBXW11 0.034 F-box and WD repeat domain containing 11 isoform C [... FBXW11 0.034 F-box and WD repeat domain containing 11 isoform A [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.