WDR16 2684

Name: WDR16	Sequence: fasta or formatted (552aa)		NCBI GI: 124028510
Description: WD40-repeat protein upregulated in HCC isoform c		Referenced in: WD Repeat Proteins
Other entries for this name: alt prot [620aa] WD40-repeat protein upregulated in HCC isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 32 2 C cysteine 2.7 15 1 D aspartate 6.0 33 4 E glutamate 5.6 31 2 F phenylalanine 3.8 21 2 G glycine 9.6 53 3 H histidine 2.4 13 1 I isoleucine 8.5 47 2 K lysine 5.3 29 2 L leucine 7.8 43 2 M methionine 2.0 11 1 N asparagine 4.3 24 2 P proline 2.9 16 1 Q glutamine 2.5 14 1 R arginine 5.6 31 2 S serine 6.5 36 2 T threonine 6.9 38 3 V valine 7.6 42 3 W tryptophan 2.0 11 1 Y tyrosine 2.2 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 WD40-repeat protein upregulated in HCC isoform c [H... WDR16 0.961 WD40-repeat protein upregulated in HCC isoform b [H... WDR51A 0.063 WD repeat domain 51A isoform 2 WDR51A 0.063 WD repeat domain 51A isoform 1 WDR51A 0.055 WD repeat domain 51A isoform 3 WDR51B 0.047 WD repeat domain 51B WDR90 0.047 WD repeat domain 90 WDR5 0.045 WD repeat domain 5 WDR5 0.045 WD repeat domain 5 ATG16L1 0.041 APG16 autophagy 16-like isoform 1 ATG16L1 0.041 APG16 autophagy 16-like isoform 2 SMU1 0.040 smu-1 suppressor of mec-8 and unc-52 homolog FBXW7 0.040 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.040 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.040 F-box and WD repeat domain containing 7 isoform 2 [H... TAF5L 0.040 PCAF associated factor 65 beta isoform a WDR5B 0.040 WD repeat domain 5B KATNB1 0.039 katanin p80 subunit B 1 PRPF19 0.039 PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom... BTRC 0.039 beta-transducin repeat containing protein isoform 2 [... BTRC 0.039 beta-transducin repeat containing protein isoform 1 ... PLRG1 0.039 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... FBXW11 0.038 F-box and WD repeat domain containing 11 isoform C [... FBXW11 0.038 F-box and WD repeat domain containing 11 isoform A [... FBXW11 0.038 F-box and WD repeat domain containing 11 isoform B [... WDR3 0.038 WD repeat-containing protein 3 WDR38 0.038 WD repeat domain 38 STRAP 0.037 serine/threonine kinase receptor associated protein... TAF5 0.036 TBP-associated factor 5 WDR61 0.036 WD repeat domain 61 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.