Guide to the Human Genome
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Name: MAPKBP1 Sequence: fasta or formatted (1508aa) NCBI GI: 190684671
Description:

mitogen-activated protein kinase binding protein 1 isoform a

Referenced in:

MAP Kinase Pathways
WD Repeat Proteins

Other entries for this name:
alt prot [1514aa] mitogen-activated protein kinase binding protein 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8        118           2
 C cysteine            2.1         32           1
 D aspartate           4.7         71           2
 E glutamate           6.5         98           7
 F phenylalanine       2.4         36           1
 G glycine             7.0        105           2
 H histidine           2.6         39           2
 I isoleucine          3.6         54           2
 K lysine              4.2         64           2
 L leucine             9.2        138           3
 M methionine          1.4         21           1
 N asparagine          2.5         38           2
 P proline             8.0        121           4
 Q glutamine           4.9         74           2
 R arginine            6.1         92           3
 S serine             12.7        191           4
 T threonine           4.8         72           2
 V valine              6.6        100           3
 W tryptophan          1.0         15           1
 Y tyrosine            1.9         29           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase binding protein 1 ... 
MAPKBP1               0.998   mitogen-activated protein kinase binding protein 1 ...
WDR62                 0.337   WD repeat domain 62 isoform 2 
WDR62                 0.336   WD repeat domain 62 isoform 1 
EML6                  0.025   echinoderm microtubule associated protein like 6 [H...
EML5                  0.019   echinoderm microtubule associated protein like 5 [Ho...
WDR16                 0.018   WD40-repeat protein upregulated in HCC isoform b [H...
WDR51B                0.017   WD repeat domain 51B 
WDR69                 0.017   WD repeat domain 69 
EML2                  0.015   echinoderm microtubule associated protein like 2 [Hom...
FLJ22184              0.014   PREDICTED: hypothetical protein FLJ22184 
WDR51A                0.014   WD repeat domain 51A isoform 3 
WDR51A                0.014   WD repeat domain 51A isoform 2 
WDR51A                0.014   WD repeat domain 51A isoform 1 
EML4                  0.014   echinoderm microtubule associated protein like 4 is...
EML4                  0.014   echinoderm microtubule associated protein like 4 iso...
BTRC                  0.013   beta-transducin repeat containing protein isoform 2 [...
BTRC                  0.013   beta-transducin repeat containing protein isoform 1 ...
FBXW11                0.013   F-box and WD repeat domain containing 11 isoform C [...
FBXW11                0.013   F-box and WD repeat domain containing 11 isoform A [...
FBXW11                0.013   F-box and WD repeat domain containing 11 isoform B [...
TAF5L                 0.013   PCAF associated factor 65 beta isoform a 
APAF1                 0.013   apoptotic peptidase activating factor 1 isoform c [H...
APAF1                 0.013   apoptotic peptidase activating factor 1 isoform a [Ho...
WDR47                 0.013   WD repeat domain 47 isoform 3 
WDR47                 0.013   WD repeat domain 47 isoform 1 
WDR47                 0.013   WD repeat domain 47 isoform 2 
PAFAH1B1              0.013   platelet-activating factor acetylhydrolase, isoform I...
EML1                  0.013   echinoderm microtubule associated protein like 1 iso...
EML1                  0.013   echinoderm microtubule associated protein like 1 iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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