Guide to the Human Genome
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Name: EML6 Sequence: fasta or formatted (1958aa) NCBI GI: 223005862
Description:

echinoderm microtubule associated protein like 6

Referenced in:

Tubulins and Microtubules
WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9        136           3
 C cysteine            2.2         44           2
 D aspartate           7.2        141           3
 E glutamate           4.9         95           2
 F phenylalanine       4.0         78           2
 G glycine             8.7        170           3
 H histidine           3.6         71           2
 I isoleucine          5.7        111           2
 K lysine              7.2        141           4
 L leucine             8.3        162           3
 M methionine          1.6         32           2
 N asparagine          3.1         60           2
 P proline             2.8         55           2
 Q glutamine           3.1         61           2
 R arginine            4.7         92           1
 S serine              6.7        131           2
 T threonine           5.7        111           2
 V valine              8.4        164           2
 W tryptophan          2.3         45           1
 Y tyrosine            3.0         58           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   echinoderm microtubule associated protein like 6 [H... 
EML5                  0.785   echinoderm microtubule associated protein like 5 [Ho...
EML2                  0.095   echinoderm microtubule associated protein like 2 [Hom...
EML1                  0.092   echinoderm microtubule associated protein like 1 iso...
EML1                  0.092   echinoderm microtubule associated protein like 1 iso...
EML4                  0.090   echinoderm microtubule associated protein like 4 is...
EML4                  0.090   echinoderm microtubule associated protein like 4 iso...
EML3                  0.075   echinoderm microtubule associated protein like 3 [H...
WDR90                 0.039   WD repeat domain 90 
WDR52                 0.027   WD repeat domain 52 
MAPKBP1               0.019   mitogen-activated protein kinase binding protein 1 ...
MAPKBP1               0.019   mitogen-activated protein kinase binding protein 1 ...
NLE1                  0.018   Notchless gene homolog isoform a 
WDR66                 0.013   WD repeat domain 66 
WDR16                 0.013   WD40-repeat protein upregulated in HCC isoform b [H...
WDR62                 0.012   WD repeat domain 62 isoform 1 
WDR62                 0.012   WD repeat domain 62 isoform 2 
TEP1                  0.011   telomerase-associated protein 1 
WDR88                 0.011   PQQ repeat and WD repeat domain containing 
KATNB1                0.011   katanin p80 subunit B 1 
SNRNP40               0.010   WD repeat domain 57 (U5 snRNP specific) 
WDR5B                 0.010   WD repeat domain 5B 
WDR5                  0.010   WD repeat domain 5 
WDR5                  0.010   WD repeat domain 5 
TBL1XR1               0.009   transducin (beta)-like 1 X-linked receptor 1 
WDR69                 0.009   WD repeat domain 69 
TAF5                  0.009   TBP-associated factor 5 
WDR3                  0.009   WD repeat-containing protein 3 
WDR61                 0.009   WD repeat domain 61 
WDR26                 0.009   WD repeat domain 26 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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