Guide to the Human Genome
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Name: EML5 Sequence: fasta or formatted (1977aa) NCBI GI: 34485720
Description:

echinoderm microtubule associated protein like 5

Referenced in:

Domain Structure of Proteins
Tubulins and Microtubules
WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4        126           2
 C cysteine            2.7         54           3
 D aspartate           7.1        141           3
 E glutamate           4.5         88           2
 F phenylalanine       3.3         66           2
 G glycine             8.8        174           3
 H histidine           3.8         76           2
 I isoleucine          6.6        131           2
 K lysine              6.3        124           3
 L leucine             8.0        158           3
 M methionine          1.9         37           2
 N asparagine          3.0         60           2
 P proline             3.3         66           2
 Q glutamine           2.6         52           2
 R arginine            5.7        112           2
 S serine              7.3        144           2
 T threonine           5.4        107           2
 V valine              7.7        153           2
 W tryptophan          2.3         46           1
 Y tyrosine            3.1         62           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   echinoderm microtubule associated protein like 5 [Ho... 
EML6                  0.772   echinoderm microtubule associated protein like 6 [H...
EML2                  0.090   echinoderm microtubule associated protein like 2 [Hom...
EML1                  0.088   echinoderm microtubule associated protein like 1 iso...
EML1                  0.088   echinoderm microtubule associated protein like 1 iso...
EML4                  0.084   echinoderm microtubule associated protein like 4 is...
EML4                  0.084   echinoderm microtubule associated protein like 4 iso...
EML3                  0.073   echinoderm microtubule associated protein like 3 [H...
WDR90                 0.031   WD repeat domain 90 
WDR52                 0.027   WD repeat domain 52 
MAPKBP1               0.014   mitogen-activated protein kinase binding protein 1 ...
NLE1                  0.014   Notchless gene homolog isoform a 
MAPKBP1               0.014   mitogen-activated protein kinase binding protein 1 ...
WDR16                 0.013   WD40-repeat protein upregulated in HCC isoform b [H...
WDR62                 0.012   WD repeat domain 62 isoform 1 
WDR62                 0.012   WD repeat domain 62 isoform 2 
WDR69                 0.011   WD repeat domain 69 
WDR5B                 0.011   WD repeat domain 5B 
WDR66                 0.010   WD repeat domain 66 
KATNB1                0.010   katanin p80 subunit B 1 
FBXW7                 0.009   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.009   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.009   F-box and WD repeat domain containing 7 isoform 2 [H...
WDR88                 0.009   PQQ repeat and WD repeat domain containing 
TBL1Y                 0.009   transducin beta-like 1Y 
TBL1Y                 0.009   transducin beta-like 1Y 
TBL1Y                 0.009   transducin beta-like 1Y 
TBL1X                 0.008   transducin beta-like 1X isoform b 
TBL1X                 0.008   transducin beta-like 1X isoform b 
TBL1X                 0.008   transducin beta-like 1X isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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