Guide to the Human Genome
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Name: WDR62 Sequence: fasta or formatted (1518aa) NCBI GI: 145580610
Description:

WD repeat domain 62 isoform 2

Referenced in:

MAP Kinase Pathways
WD Repeat Proteins

Other entries for this name:
alt prot [1523aa] WD repeat domain 62 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4        112           2
 C cysteine            2.5         38           1
 D aspartate           5.3         81           3
 E glutamate           6.7        101           3
 F phenylalanine       3.1         47           2
 G glycine             6.5         99           2
 H histidine           3.6         55           2
 I isoleucine          3.5         53           2
 K lysine              3.8         58           2
 L leucine             9.8        149           2
 M methionine          1.3         20           1
 N asparagine          2.8         42           2
 P proline             7.7        117           4
 Q glutamine           4.5         69           4
 R arginine            4.9         75           3
 S serine             10.7        162           3
 T threonine           5.5         83           2
 V valine              6.8        103           3
 W tryptophan          1.3         19           1
 Y tyrosine            2.3         35           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 62 isoform 2 
WDR62                 0.998   WD repeat domain 62 isoform 1 
MAPKBP1               0.329   mitogen-activated protein kinase binding protein 1 ...
MAPKBP1               0.327   mitogen-activated protein kinase binding protein 1 ...
WDR16                 0.019   WD40-repeat protein upregulated in HCC isoform b [H...
WDR69                 0.018   WD repeat domain 69 
EML5                  0.016   echinoderm microtubule associated protein like 5 [Ho...
EML6                  0.015   echinoderm microtubule associated protein like 6 [H...
EML1                  0.015   echinoderm microtubule associated protein like 1 iso...
EML1                  0.015   echinoderm microtubule associated protein like 1 iso...
FBXW11                0.013   F-box and WD repeat domain containing 11 isoform C [...
FBXW11                0.013   F-box and WD repeat domain containing 11 isoform A [...
FBXW11                0.013   F-box and WD repeat domain containing 11 isoform B [...
WDR51B                0.013   WD repeat domain 51B 
BTRC                  0.013   beta-transducin repeat containing protein isoform 2 [...
BTRC                  0.013   beta-transducin repeat containing protein isoform 1 ...
EML2                  0.013   echinoderm microtubule associated protein like 2 [Hom...
WDR5                  0.013   WD repeat domain 5 
WDR5                  0.013   WD repeat domain 5 
EML4                  0.012   echinoderm microtubule associated protein like 4 is...
EML4                  0.012   echinoderm microtubule associated protein like 4 iso...
WDR90                 0.011   WD repeat domain 90 
TAF5                  0.011   TBP-associated factor 5 
WDR47                 0.011   WD repeat domain 47 isoform 3 
WDR47                 0.011   WD repeat domain 47 isoform 1 
WDR47                 0.011   WD repeat domain 47 isoform 2 
EML3                  0.011   echinoderm microtubule associated protein like 3 [H...
WDR52                 0.010   WD repeat domain 52 
WDR51A                0.010   WD repeat domain 51A isoform 3 
WDR51A                0.010   WD repeat domain 51A isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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