Search of human proteins with 122937510

Search of human proteins with 122937510

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|122937510 sentan, cilia apical structure protein [Homo
sapiens]
         (147 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|122937510 sentan, cilia apical structure protein [Homo sapiens]    290   4e-79
gi|5454032 S100 calcium binding protein A1 [Homo sapiens]              54   4e-08
gi|5174661 S100 calcium binding protein A2 [Homo sapiens]              50   5e-07
gi|9845516 S100 calcium-binding protein A4 [Homo sapiens]              45   3e-05
gi|4506765 S100 calcium-binding protein A4 [Homo sapiens]              45   3e-05
gi|150010678 S100 calcium binding protein Z [Homo sapiens]             43   1e-04
gi|5454034 S100 calcium-binding protein, beta [Homo sapiens]           42   2e-04
gi|5174663 S100 calcium binding protein P [Homo sapiens]               38   0.003
gi|194294552 S100 calcium binding protein A7-like 2 [Homo sapiens]     38   0.003
gi|4506773 S100 calcium-binding protein A9 [Homo sapiens]              37   0.005
gi|62122917 filaggrin family member 2 [Homo sapiens]                   37   0.008
gi|28827815 S100 calcium binding protein A7-like 1 [Homo sapiens]      35   0.023
gi|4506767 S100 calcium binding protein A5 [Homo sapiens]              35   0.023
gi|5032057 S100 calcium binding protein A11 [Homo sapiens]             33   0.086
gi|115298657 S100 calcium binding protein A7 [Homo sapiens]            33   0.11 
gi|57864582 hornerin [Homo sapiens]                                    32   0.19 
gi|120432044 vav 3 guanine nucleotide exchange factor isoform 1 ...    32   0.19 
gi|17864088 sorting nexin 13 [Homo sapiens]                            32   0.19 
gi|4757898 calbindin 3 [Homo sapiens]                                  32   0.25 
gi|5453629 dynactin 2 [Homo sapiens]                                   31   0.42 
gi|4506763 S100 calcium binding protein A3 [Homo sapiens]              31   0.42 
gi|60097902 filaggrin [Homo sapiens]                                   30   0.55 
gi|7108367 vav 1 guanine nucleotide exchange factor [Homo sapiens]     30   0.55 
gi|197927454 DEK oncogene isoform 2 [Homo sapiens]                     30   0.55 
gi|4503249 DEK oncogene isoform 1 [Homo sapiens]                       30   0.55 
gi|31542661 transmembrane protein 57 [Homo sapiens]                    29   1.2  
gi|145275193 specifically androgen-regulated protein isoform 2 [...    29   1.6  
gi|145275189 specifically androgen-regulated protein isoform 1 [...    29   1.6  
gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens]    28   2.1  
gi|4507617 fast skeletal muscle troponin C [Homo sapiens]              28   2.1  

>gi|122937510 sentan, cilia apical structure protein [Homo sapiens]
          Length = 147

 Score =  290 bits (741), Expect = 4e-79
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MGGCMHSTQDKSLHLEGDPNPSAAPTSTCAPRKMPKRISISKQLASVKALRKCSDLEKAI 60
           MGGCMHSTQDKSLHLEGDPNPSAAPTSTCAPRKMPKRISISKQLASVKALRKCSDLEKAI
Sbjct: 1   MGGCMHSTQDKSLHLEGDPNPSAAPTSTCAPRKMPKRISISKQLASVKALRKCSDLEKAI 60

Query: 61  ATTALIFRNSSDSDGKLEKAIAKDLLQTQFRNFAEGQETKPKYREILSELDEHTENKLDF 120
           ATTALIFRNSSDSDGKLEKAIAKDLLQTQFRNFAEGQETKPKYREILSELDEHTENKLDF
Sbjct: 61  ATTALIFRNSSDSDGKLEKAIAKDLLQTQFRNFAEGQETKPKYREILSELDEHTENKLDF 120

Query: 121 EDFMILLLSITVMSDLLQNIRNVKIMK 147
           EDFMILLLSITVMSDLLQNIRNVKIMK
Sbjct: 121 EDFMILLLSITVMSDLLQNIRNVKIMK 147


>gi|5454032 S100 calcium binding protein A1 [Homo sapiens]
          Length = 94

 Score = 54.3 bits (129), Expect = 4e-08
 Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 3/82 (3%)

Query: 54  SDLEKAIATTALIFRNSSDSDG---KLEKAIAKDLLQTQFRNFAEGQETKPKYREILSEL 110
           S+LE A+ T   +F   S  +G   KL K   K+LLQT+   F + Q+      +++ EL
Sbjct: 3   SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62

Query: 111 DEHTENKLDFEDFMILLLSITV 132
           DE+ + ++DF+++++L+ ++TV
Sbjct: 63  DENGDGEVDFQEYVVLVAALTV 84


>gi|5174661 S100 calcium binding protein A2 [Homo sapiens]
          Length = 97

 Score = 50.4 bits (119), Expect = 5e-07
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 3/84 (3%)

Query: 53  CSDLEKAIATTALIFRNSSDSDG---KLEKAIAKDLLQTQFRNFAEGQETKPKYREILSE 109
           CS LE+A+A     F   S  +G   KL K   K+LL  +  +F   +  +   ++++  
Sbjct: 2   CSSLEQALAVLVTTFHKYSCQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGS 61

Query: 110 LDEHTENKLDFEDFMILLLSITVM 133
           LDE+++ ++DF+++ + L  ITVM
Sbjct: 62  LDENSDQQVDFQEYAVFLALITVM 85


>gi|9845516 S100 calcium-binding protein A4 [Homo sapiens]
          Length = 101

 Score = 44.7 bits (104), Expect = 3e-05
 Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 56  LEKAIATTALIFRNSSDSDG---KLEKAIAKDLLQTQFRNFAEGQETKPKYREILSELDE 112
           LEKA+      F   S  +G   KL K+  K+LL  +  +F   +  +  +++++S LD 
Sbjct: 5   LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDS 64

Query: 113 HTENKLDFEDFMILLLSITVM 133
           + +N++DF+++ + L  I +M
Sbjct: 65  NRDNEVDFQEYCVFLSCIAMM 85


>gi|4506765 S100 calcium-binding protein A4 [Homo sapiens]
          Length = 101

 Score = 44.7 bits (104), Expect = 3e-05
 Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 56  LEKAIATTALIFRNSSDSDG---KLEKAIAKDLLQTQFRNFAEGQETKPKYREILSELDE 112
           LEKA+      F   S  +G   KL K+  K+LL  +  +F   +  +  +++++S LD 
Sbjct: 5   LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDS 64

Query: 113 HTENKLDFEDFMILLLSITVM 133
           + +N++DF+++ + L  I +M
Sbjct: 65  NRDNEVDFQEYCVFLSCIAMM 85


>gi|150010678 S100 calcium binding protein Z [Homo sapiens]
          Length = 99

 Score = 42.7 bits (99), Expect = 1e-04
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 54  SDLEKAIATTALIFRNSSDSDGK---LEKAIAKDLLQTQFRNFAEGQETKPKYREILSEL 110
           + LE A+ T   IF   S  + K   L K   K LLQ +   F   Q+      +I+ +L
Sbjct: 3   TQLEMAMDTMIRIFHRYSGKERKRFKLSKGELKLLLQRELTEFLSCQKETQLVDKIVQDL 62

Query: 111 DEHTENKLDFEDFMILLLSITV 132
           D + +N++DF +F++++ ++TV
Sbjct: 63  DANKDNEVDFNEFVVMVAALTV 84


>gi|5454034 S100 calcium-binding protein, beta [Homo sapiens]
          Length = 92

 Score = 41.6 bits (96), Expect = 2e-04
 Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 3/81 (3%)

Query: 54  SDLEKAIATTALIFRNSSDSDG---KLEKAIAKDLLQTQFRNFAEGQETKPKYREILSEL 110
           S+LEKA+     +F   S  +G   KL+K+  K+L+  +  +F E  + +    +++  L
Sbjct: 2   SELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETL 61

Query: 111 DEHTENKLDFEDFMILLLSIT 131
           D   + + DF++FM  +  +T
Sbjct: 62  DNDGDGECDFQEFMAFVAMVT 82


>gi|5174663 S100 calcium binding protein P [Homo sapiens]
          Length = 95

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 3/81 (3%)

Query: 54  SDLEKAIATTALIFRNSSDSDGK---LEKAIAKDLLQTQFRNFAEGQETKPKYREILSEL 110
           ++LE A+     +F   S S+G    L K   K L++ +   F +  + K    ++L +L
Sbjct: 2   TELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDL 61

Query: 111 DEHTENKLDFEDFMILLLSIT 131
           D + + ++DF +F++ + +IT
Sbjct: 62  DANGDAQVDFSEFIVFVAAIT 82


>gi|194294552 S100 calcium binding protein A7-like 2 [Homo sapiens]
          Length = 112

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 57  EKAIATTALIFRNSSDSDGKLEKAIAKDLLQTQFRNFAEGQETKPK--YREILSELDEHT 114
           EK +     +FR  S  DG+++     +L++  F NF  G E          L + D++ 
Sbjct: 18  EKVMLDIVAMFRQYSGDDGRMDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALEKKDDNK 77

Query: 115 ENKLDFEDFMILLLSITV 132
           + K+++ +F+ LL  IT+
Sbjct: 78  DKKVNYSEFLSLLGDITI 95


>gi|4506773 S100 calcium-binding protein A9 [Homo sapiens]
          Length = 114

 Score = 37.4 bits (85), Expect = 0.005
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 52  KCSDLEKAIATTALIFRNSSDSDGK---LEKAIAKDLLQTQFRNFAEGQETKPKYRE-IL 107
           K S LE+ I T    F   S   G    L +   K+L++   +NF + +    K  E I+
Sbjct: 4   KMSQLERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIM 63

Query: 108 SELDEHTENKLDFEDFMILLLSIT 131
            +LD + + +L FE+F++L+  +T
Sbjct: 64  EDLDTNADKQLSFEEFIMLMARLT 87


>gi|62122917 filaggrin family member 2 [Homo sapiens]
          Length = 2391

 Score = 36.6 bits (83), Expect = 0.008
 Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 3/82 (3%)

Query: 54  SDLEKAIATTALIFRNSSDSDGK---LEKAIAKDLLQTQFRNFAEGQETKPKYREILSEL 110
           +DL +++ T   +F   +  DG+   L K   K+LL+ +     +  +       I+  L
Sbjct: 2   TDLLRSVVTVIDVFYKYTKQDGECGTLSKGELKELLEKELHPVLKNPDDPDTVDVIMHML 61

Query: 111 DEHTENKLDFEDFMILLLSITV 132
           D   + +LDF +F++++  +T+
Sbjct: 62  DRDHDRRLDFTEFLLMIFKLTM 83


>gi|28827815 S100 calcium binding protein A7-like 1 [Homo sapiens]
          Length = 101

 Score = 35.0 bits (79), Expect = 0.023
 Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 2/73 (2%)

Query: 57  EKAIATTALIFRNSSDSDGKLEKAIAKDLLQTQFRNFAEGQETKPKY--REILSELDEHT 114
           E++I     +F   +  DGK+EK     +++  F NF    + K  +    +  + D++ 
Sbjct: 7   ERSIIGMIDMFHKYTGRDGKIEKPSLLTMMKENFPNFLSACDKKGIHYLATVFEKKDKNE 66

Query: 115 ENKLDFEDFMILL 127
           + K+DF +F+ LL
Sbjct: 67  DKKIDFSEFLSLL 79


>gi|4506767 S100 calcium binding protein A5 [Homo sapiens]
          Length = 110

 Score = 35.0 bits (79), Expect = 0.023
 Identities = 16/72 (22%), Positives = 36/72 (50%)

Query: 56  LEKAIATTALIFRNSSDSDGKLEKAIAKDLLQTQFRNFAEGQETKPKYREILSELDEHTE 115
           LEKA+ T    F   S  +G       K+L +   +    G+  +    +++  LD++++
Sbjct: 23  LEKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSD 82

Query: 116 NKLDFEDFMILL 127
            ++DF+++ + L
Sbjct: 83  QEIDFKEYSVFL 94


>gi|5032057 S100 calcium binding protein A11 [Homo sapiens]
          Length = 105

 Score = 33.1 bits (74), Expect = 0.086
 Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 54  SDLEKAIATTALIFRNSSDSDG---KLEKAIAKDLLQTQFRNFAEGQETKPKYREILSEL 110
           ++ E+ I +   +F+  +  DG    L K      + T+   F + Q+       ++ +L
Sbjct: 8   TETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVLDRMMKKL 67

Query: 111 DEHTENKLDFEDFMILL 127
           D +++ +LDF +F+ L+
Sbjct: 68  DTNSDGQLDFSEFLNLI 84


>gi|115298657 S100 calcium binding protein A7 [Homo sapiens]
          Length = 101

 Score = 32.7 bits (73), Expect = 0.11
 Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 57  EKAIATTALIFRNSSDSDGKLEKAIAKDLLQTQFRNFAEGQETKPK--YREILSELDEHT 114
           E++I     +F   +  D K+EK     +++  F NF    + K      ++  + D++ 
Sbjct: 7   ERSIIGMIDMFHKYTRRDDKIEKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNE 66

Query: 115 ENKLDFEDFMILL 127
           + K+DF +F+ LL
Sbjct: 67  DKKIDFSEFLSLL 79


>gi|57864582 hornerin [Homo sapiens]
          Length = 2850

 Score = 32.0 bits (71), Expect = 0.19
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 56  LEKAIATTALIFRNSSDSDGK---LEKAIAKDLLQTQFRNFAEGQETKPKYREILSELDE 112
           L + + T   +F   +   G+   L KA  K+LL+ +F    +          IL  LD 
Sbjct: 4   LLQGVITVIDVFYQYATQHGEYDTLNKAELKELLENEFHQILKNPNDPDTVDIILQSLDR 63

Query: 113 HTENKLDFEDFMILLLSI 130
               K+DF ++++++  +
Sbjct: 64  DHNKKVDFTEYLLMIFKL 81


>gi|120432044 vav 3 guanine nucleotide exchange factor isoform 1
           [Homo sapiens]
          Length = 847

 Score = 32.0 bits (71), Expect = 0.19
 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 19/101 (18%)

Query: 53  CSDLEKAIATTALIFRNSSDSDGKLE---------KAIAKDLLQTQFRNFAEGQETKPKY 103
           CS +E AI++   I +   D   KLE         K   +DLL    +          KY
Sbjct: 282 CSGVESAISSLDYISKTKEDVKLKLEECSKRANNGKFTLRDLLVVPMQRVL-------KY 334

Query: 104 REILSELDEHTENKLDFEDFMILLLSITVMSDLLQNIRNVK 144
             +L EL +HT +  +  +   L L++  M DL Q +  VK
Sbjct: 335 HLLLQELVKHTTDPTEKAN---LKLALDAMKDLAQYVNEVK 372


>gi|17864088 sorting nexin 13 [Homo sapiens]
          Length = 957

 Score = 32.0 bits (71), Expect = 0.19
 Identities = 16/79 (20%), Positives = 45/79 (56%), Gaps = 6/79 (7%)

Query: 71  SDSDGKLEKAIAKDLLQTQFR--NFAEGQETKPKYREILSELDEHTENKLDFEDFMILLL 128
           SD+ GK+ + + +D+ Q+ F+        ++ P++R + ++LD++ ++ +     ++L+ 
Sbjct: 722 SDNMGKMSERLGQDIKQSFFKVPPLIPKTDSDPEHRRVSAQLDDNVDDNIPLRVMLLLMD 781

Query: 129 SITVMSD----LLQNIRNV 143
            +  + +    L +NI+N+
Sbjct: 782 EVFDLKERNQWLRRNIKNL 800


>gi|4757898 calbindin 3 [Homo sapiens]
          Length = 79

 Score = 31.6 bits (70), Expect = 0.25
 Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 66  IFRNSSDSDG---KLEKAIAKDLLQTQFRNFAEGQETKPKYREILSELDEHTENKLDFED 122
           IF   +  +G   +L K   K L+Q +F +  +G  T     ++  ELD++ + ++ FE+
Sbjct: 13  IFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKGPNTLD---DLFQELDKNGDGEVSFEE 69

Query: 123 FMILLLSIT 131
           F +L+  I+
Sbjct: 70  FQVLVKKIS 78


>gi|5453629 dynactin 2 [Homo sapiens]
          Length = 406

 Score = 30.8 bits (68), Expect = 0.42
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 38  ISISKQLASVKALRKCSDLEKAIATTALIFRNSSDSDGKLEKAIAKDLLQTQFRNFAEGQ 97
           + ++KQLA++K     S LEK +   A I  N +D DG L K +   L  T+      G 
Sbjct: 141 VLLAKQLAALKQQLVASHLEKLLGPDAAI--NLTDPDGALAKRLLLQLEATKNSKGGSGG 198

Query: 98  ET 99
           +T
Sbjct: 199 KT 200


>gi|4506763 S100 calcium binding protein A3 [Homo sapiens]
          Length = 101

 Score = 30.8 bits (68), Expect = 0.42
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 56  LEKAIATTALIFRNSSDSDG---KLEKAIAKDLLQTQFRNFAEGQETKPKYREILSELDE 112
           LE+A+A     F+  +   G   KL +A  K+LLQ +   +   +  +  Y + +S LD 
Sbjct: 5   LEQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDT 64

Query: 113 HTENKLDFEDFM 124
           + + ++DF +++
Sbjct: 65  NKDCEVDFVEYV 76


>gi|60097902 filaggrin [Homo sapiens]
          Length = 4061

 Score = 30.4 bits (67), Expect = 0.55
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 66  IFRNSSDSDGK---LEKAIAKDLLQTQFRNFAEGQETKPKYREILSELDEHTENKLDFED 122
           +F+  S  D     L K   K+LL+ +FR   +  +        +  LD     K+DF +
Sbjct: 14  LFKQYSKKDKNTDTLSKKELKELLEKEFRQILKNPDDPDMVDVFMDHLDIDHNKKIDFTE 73

Query: 123 FMILLLSI 130
           F++++  +
Sbjct: 74  FLLMVFKL 81


>gi|7108367 vav 1 guanine nucleotide exchange factor [Homo sapiens]
          Length = 845

 Score = 30.4 bits (67), Expect = 0.55
 Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 19/103 (18%)

Query: 51  RKCSDLEKAIATTALIFRNSSDSDGKLEKA---------IAKDLLQTQFRNFAEGQETKP 101
           R CS +E A      +     D   KLE+            +DLL    +          
Sbjct: 282 RYCSQVESASKHLDRVAAAREDVQMKLEECSQRANNGRFTLRDLLMVPMQRVL------- 334

Query: 102 KYREILSELDEHTENKLDFEDFMILLLSITVMSDLLQNIRNVK 144
           KY  +L EL +HT+  ++ E+   L L++  M DL Q +  VK
Sbjct: 335 KYHLLLQELVKHTQEAMEKEN---LRLALDAMRDLAQCVNEVK 374


>gi|197927454 DEK oncogene isoform 2 [Homo sapiens]
          Length = 341

 Score = 30.4 bits (67), Expect = 0.55
 Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 6/103 (5%)

Query: 18  DPNPSAAPTSTCAPRKMPKRISISKQLASVKALRKCSDLEKAIATTALIFRNSSDSDGKL 77
           D      P    A R+ PK+ + SK   SVK+    ++++KA ++T    +NSS  + + 
Sbjct: 214 DKESEEEPPKKTAKREKPKQKATSKSKKSVKS----ANVKKADSSTTKKNQNSSKKESES 269

Query: 78  EKAIAKDLLQTQFRNFAEGQETKPKYREIL--SELDEHTENKL 118
           E +   + L  + +     +E K   +++L  + L+E T  ++
Sbjct: 270 EDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEEVTMKQI 312


>gi|4503249 DEK oncogene isoform 1 [Homo sapiens]
          Length = 375

 Score = 30.4 bits (67), Expect = 0.55
 Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 6/103 (5%)

Query: 18  DPNPSAAPTSTCAPRKMPKRISISKQLASVKALRKCSDLEKAIATTALIFRNSSDSDGKL 77
           D      P    A R+ PK+ + SK   SVK+    ++++KA ++T    +NSS  + + 
Sbjct: 248 DKESEEEPPKKTAKREKPKQKATSKSKKSVKS----ANVKKADSSTTKKNQNSSKKESES 303

Query: 78  EKAIAKDLLQTQFRNFAEGQETKPKYREIL--SELDEHTENKL 118
           E +   + L  + +     +E K   +++L  + L+E T  ++
Sbjct: 304 EDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEEVTMKQI 346


>gi|31542661 transmembrane protein 57 [Homo sapiens]
          Length = 664

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 14/112 (12%)

Query: 37  RISISKQLASVKALRKCSDLEKAIATTALIFRNSSDSDGKLEKAIAKDLLQTQFRNFAEG 96
           R  + KQL   K  +K   LE+A A  A+ F  ++ S G+  + +   + + +       
Sbjct: 467 RSFVEKQLMEEKKRKK---LEEATAARAVAF--AAASRGECTETLRNRIRELEAEGKKLT 521

Query: 97  QETKPKYREI------LSELDEHTENKLDFEDFMILLLSITVMSDLLQNIRN 142
            + K K  +I      + EL ++ EN+ D E   +L+ +++ M D  Q++ N
Sbjct: 522 MDMKVKEDQIRELELKVQELRKYKENEKDTE---VLMSALSAMQDKTQHLEN 570


>gi|145275193 specifically androgen-regulated protein isoform 2
          [Homo sapiens]
          Length = 355

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 9  QDKSLHLEGDPNPSAAPTSTCAPRKMPKRISISKQLAS 46
          +D  L    DPN   AP +T  PRK+P  I +    +S
Sbjct: 30 EDAPLSSGEDPNSRLAPLTTPKPRKLPPNIVLKSSRSS 67


>gi|145275189 specifically androgen-regulated protein isoform 1
           [Homo sapiens]
          Length = 601

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 9   QDKSLHLEGDPNPSAAPTSTCAPRKMPKRISISKQLAS 46
           +D  L    DPN   AP +T  PRK+P  I +    +S
Sbjct: 276 EDAPLSSGEDPNSRLAPLTTPKPRKLPPNIVLKSSRSS 313


>gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens]
          Length = 1041

 Score = 28.5 bits (62), Expect = 2.1
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 11  KSLHLEGDPNPSAAPTSTCAPRKMPKRISISKQLASVKALRKCSDLEKAIATTALIFRNS 70
           ++  L+GD  PSA PTST A +K     SI     S+       +L  AIA   ++    
Sbjct: 367 RATQLQGDEEPSAPPTSTQAQQKE----SIQAVRRSLPVFPFREELLAAIANHQVLIIEG 422

Query: 71  SDSDGK 76
               GK
Sbjct: 423 ETGSGK 428


>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
          Length = 160

 Score = 28.5 bits (62), Expect = 2.1
 Identities = 10/30 (33%), Positives = 20/30 (66%)

Query: 99  TKPKYREILSELDEHTENKLDFEDFMILLL 128
           TK +   I+ E+DE     +DFE+F+++++
Sbjct: 52  TKEELDAIIEEVDEDGSGTIDFEEFLVMMV 81


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.129    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,151,053
Number of Sequences: 37866
Number of extensions: 196179
Number of successful extensions: 917
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 889
Number of HSP's gapped (non-prelim): 50
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.