Guide to the Human Genome
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Name: DCTN2 Sequence: fasta or formatted (406aa) NCBI GI: 5453629
Description:

dynactin 2

Referenced in:

Dynein and Dynactin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         37           2
 C cysteine            0.5          2           1
 D aspartate           6.2         25           2
 E glutamate           9.6         39           2
 F phenylalanine       1.7          7           1
 G glycine             5.4         22           2
 H histidine           2.0          8           1
 I isoleucine          3.0         12           2
 K lysine              8.1         33           2
 L leucine            13.1         53           3
 M methionine          1.7          7           1
 N asparagine          2.7         11           1
 P proline             3.7         15           2
 Q glutamine           7.4         30           2
 R arginine            3.4         14           1
 S serine              5.4         22           2
 T threonine           8.6         35           2
 V valine              6.2         25           1
 W tryptophan          0.2          1           1
 Y tyrosine            2.0          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dynactin 2 
CLIP1                 0.024   restin isoform b 
CLIP1                 0.024   restin isoform a 
RNF40                 0.021   ring finger protein 40 
CENPE                 0.020   centromere protein E 
DMD                   0.020   dystrophin Dp427c isoform 
DMD                   0.020   dystrophin Dp140c isoform 
DMD                   0.020   dystrophin Dp260-2 isoform 
DMD                   0.020   dystrophin Dp260-1 isoform 
DMD                   0.020   dystrophin Dp427p2 isoform 
DMD                   0.020   dystrophin Dp427p1 isoform 
DMD                   0.020   dystrophin Dp140bc isoform 
DMD                   0.020   dystrophin Dp140ab isoform 
DMD                   0.020   dystrophin Dp140b isoform 
DMD                   0.020   dystrophin Dp140 isoform 
DMD                   0.020   dystrophin Dp427l isoform 
DMD                   0.020   dystrophin Dp427m isoform 
CCDC88B               0.018   coiled-coil domain containing 88 
PCNT                  0.018   pericentrin 
NUMA1                 0.018   nuclear mitotic apparatus protein 1 
MYH9                  0.016   myosin, heavy polypeptide 9, non-muscle 
SMG1                  0.016   PI-3-kinase-related kinase SMG-1 
CCDC88A               0.016   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.016   coiled-coil domain containing 88A isoform 1 
GRIPAP1               0.016   GRIP1 associated protein 1 isoform 2 
MVP                   0.014   major vault protein 
MVP                   0.014   major vault protein 
KRT33B                0.013   type I hair keratin 3B 
CLEC4M                0.013   C-type lectin domain family 4, member M isoform 3 [...
CLEC4M                0.013   C-type lectin domain family 4, member M isoform 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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