Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KRTAP12-2 Sequence: fasta or formatted (146aa) NCBI GI: 32140184
Description:

keratin associated protein 12-2

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         10           2
 C cysteine           21.2         31           2
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       1.4          2           1
 G glycine             2.1          3           1
 H histidine           0.7          1           1
 I isoleucine          2.1          3           1
 K lysine              1.4          2           1
 L leucine             2.1          3           1
 M methionine          1.4          2           1
 N asparagine          0.0          0           0
 P proline            13.0         19           1
 Q glutamine           6.2          9           1
 R arginine            2.1          3           1
 S serine             21.9         32           2
 T threonine           1.4          2           1
 V valine             15.1         22           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 12-2 
KRTAP12-1             0.453   keratin associated protein 12-1 
KRTAP10-2             0.380   keratin associated protein 10-2 
KRTAP12-3             0.380   keratin associated protein 12-3 
KRTAP10-9             0.373   keratin associated protein 10-9 
KRTAP10-5             0.363   keratin associated protein 10-5 
KRTAP10-1             0.363   keratin associated protein 10-1 
KRTAP10-12            0.363   keratin associated protein 10-12 
KRTAP10-3             0.363   keratin associated protein 10-3 
KRTAP10-4             0.350   keratin associated protein 10-4 
KRTAP10-11            0.350   keratin associated protein 10-11 
KRTAP10-7             0.340   keratin associated protein 10-7 
KRTAP10-8             0.333   keratin associated protein 10-8 
KRTAP4-9              0.330   keratin associated protein 4-9 
KRTAP4-8              0.330   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.330   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-11             0.327   keratin associated protein 4-11 
KRTAP4-9              0.327   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-12             0.327   keratin associated protein 4-12 
KRTAP10-6             0.323   keratin associated protein 10-6 
LOC100131696          0.317   PREDICTED: keratin associated protein 
LOC100288060          0.317   PREDICTED: hypothetical protein XP_002343557 
LOC100131696          0.317   PREDICTED: keratin associated protein 
KRTAP4-3              0.313   keratin associated protein 4-3 
KRTAP4-5              0.307   keratin associated protein 4-5 
KRTAP4-8              0.307   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.307   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.303   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP10-10            0.300   keratin associated protein 10-10 
KRTAP4-8              0.300   PREDICTED: keratin associated protein 4.8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press