Guide to the Human Genome
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Name: KRTAP12-3 Sequence: fasta or formatted (96aa) NCBI GI: 148727345
Description:

keratin associated protein 12-3

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2          4           1
 C cysteine           22.9         22           2
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       0.0          0           0
 G glycine             1.0          1           1
 H histidine           2.1          2           1
 I isoleucine          5.2          5           2
 K lysine              0.0          0           0
 L leucine             1.0          1           1
 M methionine          2.1          2           1
 N asparagine          0.0          0           0
 P proline            14.6         14           2
 Q glutamine           6.2          6           1
 R arginine            3.1          3           1
 S serine             17.7         17           2
 T threonine           7.3          7           2
 V valine             10.4         10           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 12-3 
KRTAP12-1             0.759   keratin associated protein 12-1 
KRTAP12-2             0.623   keratin associated protein 12-2 
KRTAP10-5             0.347   keratin associated protein 10-5 
KRTAP4-8              0.327   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.327   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.327   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.327   keratin associated protein 4.8 
KRTAP12-4             0.327   keratin associated protein 12-4 
KRTAP4-8              0.327   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.322   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.322   PREDICTED: similar to keratin associated protein 4-...
KRTAP10-8             0.322   keratin associated protein 10-8 
KRTAP10-11            0.317   keratin associated protein 10-11 
KRTAP4-7              0.317   keratin associated protein 4-7 
KRTAP4-7              0.317   PREDICTED: keratin associated protein 4-7 
KRTAP10-3             0.317   keratin associated protein 10-3 
KRTAP10-1             0.317   keratin associated protein 10-1 
KRTAP4-11             0.312   keratin associated protein 4-11 
KRTAP4-8              0.312   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.312   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-3              0.312   keratin associated protein 4-3 
KRTAP4-12             0.312   keratin associated protein 4-12 
KRTAP4-9              0.307   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-1              0.302   keratin associated protein 4-1 
KRTAP4-5              0.296   keratin associated protein 4-5 
KRTAP4-9              0.296   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP10-9             0.296   keratin associated protein 10-9 
KRTAP9-2              0.296   keratin associated protein 9.2 
KRTAP10-12            0.291   keratin associated protein 10-12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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