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Search of human proteins with 31791012
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31791012 keratin associated protein 22-1 [Homo sapiens]
(48 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31791012 keratin associated protein 22-1 [Homo sapiens] 121 1e-28
gi|31791020 keratin associated protein 20-1 [Homo sapiens] 56 7e-09
gi|31791014 keratin associated protein 20-2 [Homo sapiens] 52 1e-07
gi|31791018 keratin associated protein 19-7 [Homo sapiens] 50 5e-07
gi|31791032 keratin associated protein 19-2 [Homo sapiens] 45 1e-05
gi|31791026 keratin associated protein 19-3 [Homo sapiens] 45 2e-05
gi|149944573 keratin associated protein 19-8 [Homo sapiens] 42 8e-05
gi|31791022 keratin associated protein 19-5 [Homo sapiens] 40 4e-04
gi|31791024 keratin associated protein 19-6 [Homo sapiens] 39 0.001
gi|239744833 PREDICTED: hypothetical protein [Homo sapiens] 37 0.003
gi|169206147 PREDICTED: hypothetical protein [Homo sapiens] 37 0.003
gi|239750526 PREDICTED: hypothetical protein [Homo sapiens] 37 0.003
gi|169205935 PREDICTED: hypothetical protein [Homo sapiens] 37 0.003
gi|31791016 keratin associated protein 21-2 [Homo sapiens] 37 0.003
gi|31791028 keratin associated protein 19-4 [Homo sapiens] 36 0.006
gi|153945796 keratin associated protein 6-3 [Homo sapiens] 36 0.006
gi|31791038 keratin associated protein 6-1 [Homo sapiens] 35 0.010
gi|31791030 keratin associated protein 19-1 [Homo sapiens] 35 0.013
gi|31791010 keratin associated protein 21-1 [Homo sapiens] 34 0.022
gi|239757562 PREDICTED: similar to Keratin-associated protein 22... 34 0.029
gi|239752072 PREDICTED: hypothetical protein XP_002348098 [Homo ... 34 0.029
gi|239746569 PREDICTED: hypothetical protein XP_002343781 [Homo ... 34 0.029
gi|31791040 keratin associated protein 6-2 [Homo sapiens] 32 0.14
gi|24430141 fibrillin 1 precursor [Homo sapiens] 29 0.70
gi|126012573 low density lipoprotein-related protein 2 [Homo sap... 29 0.92
gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens] 29 0.92
gi|4505487 occludin [Homo sapiens] 28 1.2
gi|66346695 fibrillin 2 precursor [Homo sapiens] 28 1.2
gi|189303554 keratin associated protein 20-3 [Homo sapiens] 28 1.6
gi|195972866 keratin 10 [Homo sapiens] 27 2.7
>gi|31791012 keratin associated protein 22-1 [Homo sapiens]
Length = 48
Score = 121 bits (303), Expect = 1e-28
Identities = 48/48 (100%), Positives = 48/48 (100%)
Query: 1 MSFDNNYHGGQGYAKGGLGCSYGCGLSGYGYACYCPWCYERSWFSGCF 48
MSFDNNYHGGQGYAKGGLGCSYGCGLSGYGYACYCPWCYERSWFSGCF
Sbjct: 1 MSFDNNYHGGQGYAKGGLGCSYGCGLSGYGYACYCPWCYERSWFSGCF 48
>gi|31791020 keratin associated protein 20-1 [Homo sapiens]
Length = 56
Score = 55.8 bits (133), Expect = 7e-09
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 12/58 (20%)
Query: 1 MSFDNNYHGGQGYAKGGLGCSYGC----------GLSGYGYACYCPWCYERSWFSGCF 48
M + +NY+GG GY GGLGC YGC G GYG YCP CY R W G +
Sbjct: 1 MIYYSNYYGGYGY--GGLGCGYGCGYRGYGCGYGGYGGYGNGYYCPSCYGRYWSYGFY 56
>gi|31791014 keratin associated protein 20-2 [Homo sapiens]
Length = 65
Score = 52.0 bits (123), Expect = 1e-07
Identities = 21/39 (53%), Positives = 23/39 (58%)
Query: 10 GQGYAKGGLGCSYGCGLSGYGYACYCPWCYERSWFSGCF 48
G G+ GGLGC YG G GYGY C P CY R W G +
Sbjct: 27 GYGHGYGGLGCGYGRGYGGYGYGCCRPSCYGRYWSCGFY 65
>gi|31791018 keratin associated protein 19-7 [Homo sapiens]
Length = 63
Score = 49.7 bits (117), Expect = 5e-07
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 15/63 (23%)
Query: 1 MSFDNNYHGGQGYAKGGLG---------------CSYGCGLSGYGYACYCPWCYERSWFS 45
MS+ +Y+GG GY GG G YGCG GY Y+C P CY W S
Sbjct: 1 MSYSGSYYGGLGYGCGGFGGLGYGYSCGCGSFRRLGYGCGYGGYRYSCCHPSCYGGYWSS 60
Query: 46 GCF 48
G +
Sbjct: 61 GFY 63
>gi|31791032 keratin associated protein 19-2 [Homo sapiens]
Length = 52
Score = 45.1 bits (105), Expect = 1e-05
Identities = 19/37 (51%), Positives = 21/37 (56%)
Query: 12 GYAKGGLGCSYGCGLSGYGYACYCPWCYERSWFSGCF 48
GY G GC YGCG G G C CP CY R F+G +
Sbjct: 16 GYGCGYEGCRYGCGHRGCGDGCCCPSCYRRYRFTGFY 52
>gi|31791026 keratin associated protein 19-3 [Homo sapiens]
Length = 81
Score = 44.7 bits (104), Expect = 2e-05
Identities = 20/41 (48%), Positives = 22/41 (53%)
Query: 8 HGGQGYAKGGLGCSYGCGLSGYGYACYCPWCYERSWFSGCF 48
+GG GY G G YG G GYGY CY P Y FSG +
Sbjct: 41 YGGYGYGSGFGGYGYGSGFGGYGYGCYRPSYYGGYGFSGFY 81
>gi|149944573 keratin associated protein 19-8 [Homo sapiens]
Length = 63
Score = 42.4 bits (98), Expect = 8e-05
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 15/63 (23%)
Query: 1 MSFDNNYHGGQGYAKGGLG---------------CSYGCGLSGYGYACYCPWCYERSWFS 45
MS+ +Y+GG GY GG G YGCG GYG++C P Y FS
Sbjct: 1 MSYYRSYYGGLGYGYGGFGGWGYGYGCGYGSFRRLGYGCGYGGYGFSCCRPLYYGGYGFS 60
Query: 46 GCF 48
+
Sbjct: 61 AFY 63
>gi|31791022 keratin associated protein 19-5 [Homo sapiens]
Length = 72
Score = 40.0 bits (92), Expect = 4e-04
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 24/72 (33%)
Query: 1 MSFDNNYHGGQGYAKGG---LGCSYGCG---------------------LSGYGYACYCP 36
M++ NY+GG GY GG LG YGCG GYGY P
Sbjct: 1 MNYYGNYYGGLGYGYGGFDDLGYGYGCGCGSFRRLGYGGGYGGYGYGSGFGGYGYRSCRP 60
Query: 37 WCYERSWFSGCF 48
CY FSG +
Sbjct: 61 SCYGGYGFSGFY 72
>gi|31791024 keratin associated protein 19-6 [Homo sapiens]
Length = 58
Score = 38.5 bits (88), Expect = 0.001
Identities = 19/40 (47%), Positives = 20/40 (50%)
Query: 9 GGQGYAKGGLGCSYGCGLSGYGYACYCPWCYERSWFSGCF 48
GG GY G G YG G GY Y C P C E FSG +
Sbjct: 19 GGLGYGCGCGGYRYGSGYGGYRYGCCRPSCREGYGFSGFY 58
>gi|239744833 PREDICTED: hypothetical protein [Homo sapiens]
Length = 129
Score = 37.4 bits (85), Expect = 0.003
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 10/49 (20%)
Query: 7 YHGGQGYAKG-GLGCSYGCGL---------SGYGYACYCPWCYERSWFS 45
Y G G G G GC YGCG SG GY Y P+C+ R + S
Sbjct: 80 YGSGSGCGYGTGFGCGYGCGYGTGYGCGCGSGSGYCGYRPFCFRRCYSS 128
Score = 30.8 bits (68), Expect = 0.24
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Query: 2 SFDNNYHGGQGYAKGGLGCSYGCGLSGYGYAC 33
S+ Y G GY G G SYGCG G GY+C
Sbjct: 15 SYGCGYGSGYGY---GYGSSYGCGY-GTGYSC 42
Score = 29.3 bits (64), Expect = 0.70
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 4/27 (14%)
Query: 10 GQGYAKG---GLGCSYGCGLSGYGYAC 33
G GY G G G SYGCG G GY+C
Sbjct: 45 GCGYGSGYGCGYGSSYGCGY-GTGYSC 70
Score = 26.2 bits (56), Expect = 6.0
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 6 NYHGGQGYAKGGLGCSYGCGLSGYGY 31
NY+G GC YG G GYGY
Sbjct: 4 NYYGNSCGYGSSYGCGYGSGY-GYGY 28
>gi|169206147 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 37.0 bits (84), Expect = 0.003
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 10/49 (20%)
Query: 7 YHGGQGYAKG-GLGCSYGCGL---------SGYGYACYCPWCYERSWFS 45
Y G G G G GC YGCG SG GY Y P+C+ R + S
Sbjct: 44 YGSGSGCGYGTGYGCGYGCGYGTGYGCGCGSGSGYCGYRPFCFRRCYSS 92
Score = 30.8 bits (68), Expect = 0.24
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 5/28 (17%)
Query: 6 NYHGGQGYAKGGLGCSYGCGLSGYGYAC 33
NY+G G GCSYGCG G GY C
Sbjct: 4 NYYGNSC----GYGCSYGCGY-GSGYGC 26
>gi|239750526 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 37.0 bits (84), Expect = 0.003
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 10/49 (20%)
Query: 7 YHGGQGYAKG-GLGCSYGCGL---------SGYGYACYCPWCYERSWFS 45
Y G G G G GC YGCG SG GY Y P+C+ R + S
Sbjct: 44 YGSGSGCGYGTGYGCGYGCGYGTGYGCGCGSGSGYCGYRPFCFRRCYSS 92
Score = 30.8 bits (68), Expect = 0.24
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 5/28 (17%)
Query: 6 NYHGGQGYAKGGLGCSYGCGLSGYGYAC 33
NY+G G GCSYGCG G GY C
Sbjct: 4 NYYGNSC----GYGCSYGCGY-GSGYGC 26
>gi|169205935 PREDICTED: hypothetical protein [Homo sapiens]
Length = 123
Score = 37.0 bits (84), Expect = 0.003
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 10/49 (20%)
Query: 7 YHGGQGYAKG-GLGCSYGCGL---------SGYGYACYCPWCYERSWFS 45
Y G G G G GC YGCG SG GY Y P+C+ R + S
Sbjct: 74 YGSGSGCGYGTGYGCGYGCGYGTGYGCGCGSGSGYCGYRPFCFRRCYSS 122
Score = 30.8 bits (68), Expect = 0.24
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 5/28 (17%)
Query: 6 NYHGGQGYAKGGLGCSYGCGLSGYGYAC 33
NY+G G GCSYGCG G GY C
Sbjct: 34 NYYGNSC----GYGCSYGCGY-GSGYGC 56
>gi|31791016 keratin associated protein 21-2 [Homo sapiens]
Length = 83
Score = 37.0 bits (84), Expect = 0.003
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 3 FDNNYHGGQGYAKG-GLGCSYGCGLSGYGYAC--YCPWCYERSWFSGCF 48
+ + Y G GY G G GC YGC GY +C Y P CY R +S C+
Sbjct: 39 YGSGYGTGCGYGCGYGSGCGYGC---GYSSSCCGYRPLCYRRC-YSSCY 83
>gi|31791028 keratin associated protein 19-4 [Homo sapiens]
Length = 84
Score = 36.2 bits (82), Expect = 0.006
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 15/60 (25%)
Query: 1 MSFDNNYHGGQGYAKGGLG---------------CSYGCGLSGYGYACYCPWCYERSWFS 45
MS+ +Y+ G GY GG G YGCG G GY P CY FS
Sbjct: 1 MSYYGSYYRGLGYGCGGFGGLGYGYGCGCGSFRRLGYGCGFGGNGYGYCRPSCYGGYGFS 60
>gi|153945796 keratin associated protein 6-3 [Homo sapiens]
Length = 110
Score = 36.2 bits (82), Expect = 0.006
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
Query: 2 SFDNNYHGGQGYA---KGGLGCSYGCGLSGYGYAC 33
S+ NY+GG GY GGLGC YG G GY C
Sbjct: 11 SYYRNYNGGHGYGCCGYGGLGCGYG----GCGYGC 41
Score = 33.1 bits (74), Expect = 0.049
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 8 HGGQGYAKGGLGCSYGCGLSGYGYACYC 35
+GG G+ GGL C YG GYG C C
Sbjct: 44 YGGLGFGYGGLDCGYGGLGCGYGSFCGC 71
Score = 32.3 bits (72), Expect = 0.083
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Query: 8 HGGQGYAKGGLGCSY----GCGLSGYGYACYCPWCYERSWFSGC 47
+GG GGLGC Y GCG G C + Y F GC
Sbjct: 51 YGGLDCGYGGLGCGYGSFCGCGYRGLDCGYGCGYGYVSHSFCGC 94
>gi|31791038 keratin associated protein 6-1 [Homo sapiens]
Length = 71
Score = 35.4 bits (80), Expect = 0.010
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 18/44 (40%)
Query: 8 HGGQGYAKGGLGCSYG--CG----------------LSGYGYAC 33
+GG GY GGLGC YG CG L GYGY C
Sbjct: 20 YGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGSRSLCGYGYGC 63
Score = 32.3 bits (72), Expect = 0.083
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 2 SFDNNYHGGQGYA---KGGLGCSYGCGLSGYGYACYC 35
S+ NY+G GY GGLG YG GYG C C
Sbjct: 4 SYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGC 40
>gi|31791030 keratin associated protein 19-1 [Homo sapiens]
Length = 90
Score = 35.0 bits (79), Expect = 0.013
Identities = 22/47 (46%), Positives = 25/47 (53%), Gaps = 8/47 (17%)
Query: 1 MSFDNNYHGGQGYAKGGLGCSYGCGLSGYGYACYCPWCYERSWFSGC 47
MS +Y+GG GY+ GG G GL GYGY C C R SGC
Sbjct: 1 MSHYGSYYGGLGYSCGGFG-----GL-GYGYGCGCGSFCRRG--SGC 39
Score = 34.7 bits (78), Expect = 0.017
Identities = 17/40 (42%), Positives = 18/40 (45%)
Query: 9 GGQGYAKGGLGCSYGCGLSGYGYACYCPWCYERSWFSGCF 48
G GY G G YG G GYGY C P FSG +
Sbjct: 51 GSYGYGSGFGGYGYGSGFGGYGYGCCRPSYNGGYGFSGFY 90
Score = 30.4 bits (67), Expect = 0.32
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 8 HGGQGYAKGGLGCSYGCGLSGYGY 31
+GG GY G YG G GYGY
Sbjct: 41 YGGYGYGSGFGSYGYGSGFGGYGY 64
>gi|31791010 keratin associated protein 21-1 [Homo sapiens]
Length = 79
Score = 34.3 bits (77), Expect = 0.022
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 8 HGGQGYAKGGLGCSYGCGLSGYGYACYCPWCYERSWFS 45
H G GY G GC YG SG GY Y P+C+ R + S
Sbjct: 45 HYGCGYGTG-YGCGYG---SGSGYCGYRPFCFRRCYSS 78
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 5/33 (15%)
Query: 6 NYHGGQGYAKGGLGCSYGCGLS-----GYGYAC 33
NY+G G GC YG G G GY C
Sbjct: 4 NYYGNSCGYGSGCGCGYGSGSGCGCGYGTGYGC 36
>gi|239757562 PREDICTED: similar to Keratin-associated protein
22-2 [Homo sapiens]
Length = 45
Score = 33.9 bits (76), Expect = 0.029
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 1 MSFDNNYHGGQGYAKGGLGCSYGCGLSGYGYACYCPWCYER 41
M + +NY+G Y GCSYG GYAC P Y R
Sbjct: 1 MCYYHNYYGSLDY-----GCSYGSEYGNSGYACNFPCSYGR 36
>gi|239752072 PREDICTED: hypothetical protein XP_002348098 [Homo
sapiens]
Length = 45
Score = 33.9 bits (76), Expect = 0.029
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 1 MSFDNNYHGGQGYAKGGLGCSYGCGLSGYGYACYCPWCYER 41
M + +NY+G Y GCSYG GYAC P Y R
Sbjct: 1 MCYYHNYYGSLDY-----GCSYGSEYGNSGYACNFPCSYGR 36
>gi|239746569 PREDICTED: hypothetical protein XP_002343781 [Homo
sapiens]
Length = 45
Score = 33.9 bits (76), Expect = 0.029
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 1 MSFDNNYHGGQGYAKGGLGCSYGCGLSGYGYACYCPWCYER 41
M + +NY+G Y GCSYG GYAC P Y R
Sbjct: 1 MCYYHNYYGSLDY-----GCSYGSEYGNSGYACNFPCSYGR 36
>gi|31791040 keratin associated protein 6-2 [Homo sapiens]
Length = 62
Score = 31.6 bits (70), Expect = 0.14
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 2 SFDNNYHGGQGYA---KGGLGCSYGCGLSGYGYACYCPWCYERSWFSGC 47
S+ NY+G GY GLG YG GY C Y +F GC
Sbjct: 4 SYYGNYYGDHGYGCCGYEGLGYGYGSLRCGYSSCCGYGHGYGSRFFCGC 52
Score = 25.8 bits (55), Expect = 7.8
Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Query: 10 GQGY-AKGGLGCSYGCGLSGYGY 31
G GY ++ GC YGCG SGY Y
Sbjct: 41 GHGYGSRFFCGCGYGCG-SGYYY 62
>gi|24430141 fibrillin 1 precursor [Homo sapiens]
Length = 2871
Score = 29.3 bits (64), Expect = 0.70
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 20 CSYGCGLSGYGYACYCPWCYER 41
CSYGC + GY C CP Y R
Sbjct: 2659 CSYGCSNTEGGYLCGCPPGYFR 2680
>gi|126012573 low density lipoprotein-related protein 2 [Homo
sapiens]
Length = 4655
Score = 28.9 bits (63), Expect = 0.92
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 18 LGCSYGCGLSGYGYACYCP 36
L C Y C + YG AC+CP
Sbjct: 315 LNCQYQCHETPYGGACFCP 333
>gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens]
Length = 1541
Score = 28.9 bits (63), Expect = 0.92
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 19 GCSYGCGLSGYGYACYCPWCYE 40
GCS+GC + G C CP YE
Sbjct: 341 GCSHGCSHTSAGPLCTCPRGYE 362
>gi|4505487 occludin [Homo sapiens]
Length = 522
Score = 28.5 bits (62), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 8 HGGQGYAKGGLGCSYGCGLSGYGYACY 34
+GG G+ G G YG G GYGY Y
Sbjct: 106 YGGSGFGSYGSGYGYGYGY-GYGYGGY 131
>gi|66346695 fibrillin 2 precursor [Homo sapiens]
Length = 2912
Score = 28.5 bits (62), Expect = 1.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 20 CSYGCGLSGYGYACYCPWCYER 41
C+YGC + GY C CP Y R
Sbjct: 2706 CNYGCSNTEGGYLCGCPPGYYR 2727
>gi|189303554 keratin associated protein 20-3 [Homo sapiens]
Length = 44
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 10/42 (23%)
Query: 1 MSFDNNYHGGQGYAKGGLGC--SYGCGLSGY-----GYACYC 35
MS+ NY+GG GY G C SY G + GY C C
Sbjct: 1 MSYYGNYYGGLGY---GYDCKYSYTSGFGAFRILDCGYRCGC 39
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 27.3 bits (59), Expect = 2.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 2 SFDNNYHGGQGYAKGGLGCSYGCGLSGYG 30
SF GG G+ GG G +G G G G
Sbjct: 111 SFGGGSFGGGGFGGGGFGGGFGGGFGGDG 139
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.148 0.593
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,438,286
Number of Sequences: 37866
Number of extensions: 83521
Number of successful extensions: 735
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 573
Number of HSP's gapped (non-prelim): 120
length of query: 48
length of database: 18,247,518
effective HSP length: 22
effective length of query: 26
effective length of database: 17,414,466
effective search space: 452776116
effective search space used: 452776116
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.