| Name: CLIC6 | Sequence: fasta or formatted (686aa) | NCBI GI: 27894378 | |
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Description: chloride intracellular channel 6
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 13.8 95 3 C cysteine 0.4 3 1 D aspartate 7.4 51 1 E glutamate 14.9 102 3 F phenylalanine 2.0 14 1 G glycine 13.7 94 4 H histidine 1.2 8 1 I isoleucine 2.3 16 2 K lysine 3.5 24 2 L leucine 4.5 31 2 M methionine 0.9 6 1 N asparagine 2.9 20 2 P proline 8.6 59 2 Q glutamine 2.9 20 2 R arginine 5.4 37 2 S serine 6.0 41 2 T threonine 2.5 17 2 V valine 5.4 37 1 W tryptophan 0.4 3 1 Y tyrosine 1.2 8 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 chloride intracellular channel 6 CLIC4 0.263 chloride intracellular channel 4 CLIC5 0.254 chloride intracellular channel 5 isoform b CLIC5 0.254 chloride intracellular channel 5 isoform a CLIC2 0.225 chloride intracellular channel 2 CLIC1 0.212 chloride intracellular channel 1 CLIC3 0.148 chloride intracellular channel 3 RPGR 0.071 retinitis pigmentosa GTPase regulator isoform C [Hom... RP1L1 0.064 retinitis pigmentosa 1-like 1 COL2A1 0.055 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.055 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL1A1 0.054 alpha 1 type I collagen preproprotein COL1A2 0.052 alpha 2 type I collagen COL7A1 0.049 alpha 1 type VII collagen precursor COL11A2 0.047 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.047 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.047 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL3A1 0.047 collagen type III alpha 1 preproprotein LOC100293055 0.046 PREDICTED: similar to COL22A1 protein COL5A3 0.046 collagen, type V, alpha 3 preproprotein COL5A1 0.043 alpha 1 type V collagen preproprotein COL5A2 0.042 alpha 2 type V collagen preproprotein COL28A1 0.042 collagen, type XXVIII precursor COL9A2 0.041 alpha 2 type IX collagen COL13A1 0.041 alpha 1 type XIII collagen isoform 11 COL13A1 0.041 alpha 1 type XIII collagen isoform 8 COL23A1 0.041 collagen, type XXIII, alpha 1 COL9A3 0.040 alpha 3 type IX collagen COL11A1 0.039 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.039 alpha 1 type XI collagen isoform C preproprotein [Ho...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
