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Name: KCNH5 Sequence: fasta or formatted (624aa) NCBI GI: 27886648
Description:

potassium voltage-gated channel, subfamily H, member 5 isoform 2

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [988aa] potassium voltage-gated channel, subfamily H, member 5 isoform 1
alt prot [611aa] potassium voltage-gated channel, subfamily H, member 5 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         38           2
 C cysteine            2.4         15           1
 D aspartate           5.4         34           2
 E glutamate           4.5         28           1
 F phenylalanine       5.4         34           1
 G glycine             4.6         29           2
 H histidine           2.4         15           1
 I isoleucine          6.7         42           2
 K lysine              5.6         35           2
 L leucine            11.1         69           2
 M methionine          2.7         17           3
 N asparagine          4.5         28           2
 P proline             3.0         19           2
 Q glutamine           2.7         17           2
 R arginine            4.0         25           1
 S serine              6.4         40           2
 T threonine           7.2         45           2
 V valine              8.7         54           2
 W tryptophan          2.1         13           1
 Y tyrosine            4.3         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium voltage-gated channel, subfamily H, member... 
KCNH5                 0.985   potassium voltage-gated channel, subfamily H, member...
KCNH1                 0.878   potassium voltage-gated channel, subfamily H, member ...
KCNH5                 0.876   potassium voltage-gated channel, subfamily H, member...
KCNH1                 0.866   potassium voltage-gated channel, subfamily H, member...
KCNH6                 0.368   potassium voltage-gated channel, subfamily H, member...
KCNH7                 0.359   potassium voltage-gated channel, subfamily H, member...
KCNH8                 0.355   potassium voltage-gated channel, subfamily H, member...
KCNH2                 0.353   voltage-gated potassium channel, subfamily H, member ...
KCNH2                 0.351   voltage-gated potassium channel, subfamily H, member...
KCNH3                 0.336   potassium voltage-gated channel, subfamily H (eag-re...
KCNH4                 0.332   potassium voltage-gated channel, subfamily H, member ...
KCNH2                 0.313   voltage-gated potassium channel, subfamily H, member...
KCNH6                 0.302   potassium voltage-gated channel, subfamily H, member...
KCNH7                 0.243   potassium voltage-gated channel, subfamily H, member...
HCN1                  0.122   hyperpolarization activated cyclic nucleotide-gated...
HCN4                  0.117   hyperpolarization activated cyclic nucleotide-gated p...
HCN2                  0.115   hyperpolarization activated cyclic nucleotide-gated...
HCN3                  0.112   hyperpolarization activated cyclic nucleotide-gated ...
CNGA2                 0.101   cyclic nucleotide gated channel alpha 2 
CNGA3                 0.099   cyclic nucleotide gated channel alpha 3 isoform 2 [...
CNGA3                 0.099   cyclic nucleotide gated channel alpha 3 isoform 1 [Ho...
CNGA1                 0.094   cyclic nucleotide gated channel alpha 1 isoform 1 [...
CNGA1                 0.094   cyclic nucleotide gated channel alpha 1 isoform 2 [H...
CNGA4                 0.086   cyclic nucleotide gated channel alpha 4 
CNGB1                 0.067   cyclic nucleotide gated channel beta 1 isoform a [H...
CNGB3                 0.066   cyclic nucleotide gated channel beta 3 
KCNK17                0.016   potassium channel, subfamily K, member 17 isoform 2...
KCNK17                0.016   potassium channel, subfamily K, member 17 isoform 1 ...
KCNK2                 0.015   potassium channel, subfamily K, member 2 isoform b [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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