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Name: KCNH5 Sequence: fasta or formatted (988aa) NCBI GI: 22024390
Description:

potassium voltage-gated channel, subfamily H, member 5 isoform 1

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [611aa] potassium voltage-gated channel, subfamily H, member 5 isoform 3
alt prot [624aa] potassium voltage-gated channel, subfamily H, member 5 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         53           2
 C cysteine            2.0         20           1
 D aspartate           5.5         54           2
 E glutamate           5.9         58           4
 F phenylalanine       4.3         42           1
 G glycine             4.8         47           2
 H histidine           2.2         22           1
 I isoleucine          6.2         61           2
 K lysine              7.0         69           2
 L leucine            10.1        100           2
 M methionine          2.3         23           3
 N asparagine          4.8         47           2
 P proline             4.4         43           2
 Q glutamine           4.4         43           2
 R arginine            4.5         44           2
 S serine              7.9         78           2
 T threonine           6.2         61           2
 V valine              7.8         77           2
 W tryptophan          1.5         15           1
 Y tyrosine            3.1         31           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium voltage-gated channel, subfamily H, member... 
KCNH1                 0.728   potassium voltage-gated channel, subfamily H, member ...
KCNH1                 0.721   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.623   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.615   potassium voltage-gated channel, subfamily H, member...
KCNH6                 0.262   potassium voltage-gated channel, subfamily H, member...
KCNH8                 0.255   potassium voltage-gated channel, subfamily H, member...
KCNH3                 0.243   potassium voltage-gated channel, subfamily H (eag-re...
KCNH4                 0.238   potassium voltage-gated channel, subfamily H, member ...
KCNH7                 0.227   potassium voltage-gated channel, subfamily H, member...
KCNH2                 0.223   voltage-gated potassium channel, subfamily H, member ...
KCNH2                 0.222   voltage-gated potassium channel, subfamily H, member...
KCNH6                 0.220   potassium voltage-gated channel, subfamily H, member...
KCNH2                 0.198   voltage-gated potassium channel, subfamily H, member...
KCNH7                 0.154   potassium voltage-gated channel, subfamily H, member...
HCN1                  0.077   hyperpolarization activated cyclic nucleotide-gated...
HCN4                  0.074   hyperpolarization activated cyclic nucleotide-gated p...
HCN2                  0.073   hyperpolarization activated cyclic nucleotide-gated...
HCN3                  0.071   hyperpolarization activated cyclic nucleotide-gated ...
CNGA2                 0.065   cyclic nucleotide gated channel alpha 2 
CNGA3                 0.064   cyclic nucleotide gated channel alpha 3 isoform 2 [...
CNGA3                 0.064   cyclic nucleotide gated channel alpha 3 isoform 1 [Ho...
CNGA1                 0.061   cyclic nucleotide gated channel alpha 1 isoform 1 [...
CNGA1                 0.061   cyclic nucleotide gated channel alpha 1 isoform 2 [H...
CNGA4                 0.055   cyclic nucleotide gated channel alpha 4 
CNGB1                 0.042   cyclic nucleotide gated channel beta 1 isoform a [H...
CNGB3                 0.042   cyclic nucleotide gated channel beta 3 
KCNK17                0.010   potassium channel, subfamily K, member 17 isoform 2...
KCNK17                0.010   potassium channel, subfamily K, member 17 isoform 1 ...
KCNK2                 0.010   potassium channel, subfamily K, member 2 isoform b [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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