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Name: KCNH6 Sequence: fasta or formatted (905aa) NCBI GI: 27886651
Description:

potassium voltage-gated channel, subfamily H, member 6 isoform 2

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [994aa] potassium voltage-gated channel, subfamily H, member 6 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         67           2
 C cysteine            2.5         23           1
 D aspartate           5.1         46           2
 E glutamate           4.6         42           2
 F phenylalanine       4.8         43           2
 G glycine             6.2         56           2
 H histidine           3.2         29           1
 I isoleucine          5.3         48           2
 K lysine              3.3         30           1
 L leucine            11.8        107           3
 M methionine          1.8         16           1
 N asparagine          2.9         26           1
 P proline             6.9         62           2
 Q glutamine           4.9         44           2
 R arginine            5.6         51           2
 S serine              8.7         79           3
 T threonine           4.8         43           3
 V valine              6.3         57           3
 W tryptophan          1.2         11           1
 Y tyrosine            2.8         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium voltage-gated channel, subfamily H, member... 
KCNH6                 0.968   potassium voltage-gated channel, subfamily H, member...
KCNH2                 0.435   voltage-gated potassium channel, subfamily H, member ...
KCNH7                 0.420   potassium voltage-gated channel, subfamily H, member...
KCNH2                 0.405   voltage-gated potassium channel, subfamily H, member...
KCNH2                 0.375   voltage-gated potassium channel, subfamily H, member...
KCNH7                 0.251   potassium voltage-gated channel, subfamily H, member...
KCNH8                 0.249   potassium voltage-gated channel, subfamily H, member...
KCNH4                 0.245   potassium voltage-gated channel, subfamily H, member ...
KCNH5                 0.238   potassium voltage-gated channel, subfamily H, member...
KCNH1                 0.221   potassium voltage-gated channel, subfamily H, member ...
KCNH1                 0.216   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.207   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.205   potassium voltage-gated channel, subfamily H, member...
KCNH3                 0.138   potassium voltage-gated channel, subfamily H (eag-re...
HCN4                  0.080   hyperpolarization activated cyclic nucleotide-gated p...
HCN2                  0.079   hyperpolarization activated cyclic nucleotide-gated...
HCN1                  0.077   hyperpolarization activated cyclic nucleotide-gated...
HCN3                  0.076   hyperpolarization activated cyclic nucleotide-gated ...
CNGA3                 0.065   cyclic nucleotide gated channel alpha 3 isoform 2 [...
CNGA3                 0.065   cyclic nucleotide gated channel alpha 3 isoform 1 [Ho...
CNGA1                 0.063   cyclic nucleotide gated channel alpha 1 isoform 1 [...
CNGA1                 0.063   cyclic nucleotide gated channel alpha 1 isoform 2 [H...
CNGA2                 0.056   cyclic nucleotide gated channel alpha 2 
CNGA4                 0.053   cyclic nucleotide gated channel alpha 4 
CNGB1                 0.033   cyclic nucleotide gated channel beta 1 isoform a [H...
CNGB3                 0.030   cyclic nucleotide gated channel beta 3 
KCNS2                 0.011   potassium voltage-gated channel, delayed-rectifier, ...
KCNG2                 0.009   potassium voltage-gated channel, subfamily G, member ...
KCNV1                 0.009   potassium channel, subfamily V, member 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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