HCN1 1799

Name: HCN1	Sequence: fasta or formatted (890aa)		NCBI GI: 116325989
Description: hyperpolarization activated cyclic nucleotide-gated potassium channel 1		Referenced in: Potassium Channels
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 58 3 C cysteine 1.2 11 1 D aspartate 3.9 35 2 E glutamate 4.8 43 2 F phenylalanine 4.6 41 2 G glycine 7.0 62 12 H histidine 2.1 19 1 I isoleucine 5.4 48 2 K lysine 4.4 39 2 L leucine 8.2 73 3 M methionine 3.7 33 2 N asparagine 4.0 36 2 P proline 7.4 66 4 Q glutamine 6.0 53 3 R arginine 5.2 46 2 S serine 8.8 78 3 T threonine 6.3 56 3 V valine 6.3 56 2 W tryptophan 1.0 9 1 Y tyrosine 3.1 28 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hyperpolarization activated cyclic nucleotide-gated... HCN4 0.553 hyperpolarization activated cyclic nucleotide-gated p... HCN2 0.550 hyperpolarization activated cyclic nucleotide-gated... HCN3 0.484 hyperpolarization activated cyclic nucleotide-gated ... CNGA3 0.091 cyclic nucleotide gated channel alpha 3 isoform 2 [... CNGA3 0.091 cyclic nucleotide gated channel alpha 3 isoform 1 [Ho... KCNH1 0.086 potassium voltage-gated channel, subfamily H, member ... CNGA1 0.086 cyclic nucleotide gated channel alpha 1 isoform 1 [... CNGA1 0.086 cyclic nucleotide gated channel alpha 1 isoform 2 [H... CNGA2 0.086 cyclic nucleotide gated channel alpha 2 KCNH6 0.086 potassium voltage-gated channel, subfamily H, member... KCNH5 0.085 potassium voltage-gated channel, subfamily H, member... KCNH5 0.085 potassium voltage-gated channel, subfamily H, member... KCNH2 0.085 voltage-gated potassium channel, subfamily H, member... KCNH2 0.085 voltage-gated potassium channel, subfamily H, member ... KCNH1 0.083 potassium voltage-gated channel, subfamily H, member... KCNH7 0.082 potassium voltage-gated channel, subfamily H, member... KCNH6 0.079 potassium voltage-gated channel, subfamily H, member... KCNH4 0.078 potassium voltage-gated channel, subfamily H, member ... CNGA4 0.075 cyclic nucleotide gated channel alpha 4 KCNH5 0.074 potassium voltage-gated channel, subfamily H, member... KCNH8 0.074 potassium voltage-gated channel, subfamily H, member... CNGB1 0.074 cyclic nucleotide gated channel beta 1 isoform a [H... KCNH2 0.070 voltage-gated potassium channel, subfamily H, member... KCNH3 0.068 potassium voltage-gated channel, subfamily H (eag-re... KCNH7 0.061 potassium voltage-gated channel, subfamily H, member... CNGB3 0.061 cyclic nucleotide gated channel beta 3 MUC2 0.022 mucin 2 precursor PRG4 0.019 proteoglycan 4 isoform D PRG4 0.019 proteoglycan 4 isoform C Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.