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Name: KCNH2 Sequence: fasta or formatted (888aa) NCBI GI: 26051271
Description:

voltage-gated potassium channel, subfamily H, member 2 isoform b

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [819aa] voltage-gated potassium channel, subfamily H, member 2 isoform c
alt prot [1159aa] voltage-gated potassium channel, subfamily H, member 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         87           3
 C cysteine            2.3         20           1
 D aspartate           4.2         37           2
 E glutamate           4.6         41           2
 F phenylalanine       4.2         37           1
 G glycine             7.7         68           2
 H histidine           3.0         27           1
 I isoleucine          6.0         53           2
 K lysine              3.4         30           1
 L leucine            10.9         97           3
 M methionine          2.5         22           1
 N asparagine          3.2         28           1
 P proline             6.2         55           4
 Q glutamine           2.6         23           1
 R arginine            6.6         59           2
 S serine              7.4         66           2
 T threonine           5.0         44           2
 V valine              6.3         56           3
 W tryptophan          1.7         15           1
 Y tyrosine            2.6         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   voltage-gated potassium channel, subfamily H, member... 
KCNH2                 0.895   voltage-gated potassium channel, subfamily H, member ...
KCNH7                 0.592   potassium voltage-gated channel, subfamily H, member...
KCNH7                 0.510   potassium voltage-gated channel, subfamily H, member...
KCNH2                 0.473   voltage-gated potassium channel, subfamily H, member...
KCNH6                 0.439   potassium voltage-gated channel, subfamily H, member...
KCNH6                 0.383   potassium voltage-gated channel, subfamily H, member...
KCNH8                 0.226   potassium voltage-gated channel, subfamily H, member...
KCNH4                 0.224   potassium voltage-gated channel, subfamily H, member ...
KCNH1                 0.222   potassium voltage-gated channel, subfamily H, member ...
KCNH5                 0.219   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.219   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.217   potassium voltage-gated channel, subfamily H, member...
KCNH1                 0.216   potassium voltage-gated channel, subfamily H, member...
KCNH3                 0.208   potassium voltage-gated channel, subfamily H (eag-re...
HCN3                  0.073   hyperpolarization activated cyclic nucleotide-gated ...
HCN4                  0.072   hyperpolarization activated cyclic nucleotide-gated p...
HCN2                  0.071   hyperpolarization activated cyclic nucleotide-gated...
HCN1                  0.070   hyperpolarization activated cyclic nucleotide-gated...
CNGA3                 0.064   cyclic nucleotide gated channel alpha 3 isoform 2 [...
CNGA3                 0.064   cyclic nucleotide gated channel alpha 3 isoform 1 [Ho...
CNGA1                 0.059   cyclic nucleotide gated channel alpha 1 isoform 1 [...
CNGA1                 0.059   cyclic nucleotide gated channel alpha 1 isoform 2 [H...
CNGA2                 0.054   cyclic nucleotide gated channel alpha 2 
CNGA4                 0.052   cyclic nucleotide gated channel alpha 4 
CNGB3                 0.036   cyclic nucleotide gated channel beta 3 
CNGB1                 0.034   cyclic nucleotide gated channel beta 1 isoform a [H...
JMY                   0.010   junction-mediating and regulatory protein 
KCNK17                0.009   potassium channel, subfamily K, member 17 isoform 2...
KCNK17                0.009   potassium channel, subfamily K, member 17 isoform 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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