CNGB1 1411

Name: CNGB1	Sequence: fasta or formatted (1251aa)		NCBI GI: 114205399
Description: cyclic nucleotide gated channel beta 1 isoform a		Referenced in: Calcium and TRP Cation Channels Photoreceptors and Related Functions
Other entries for this name: alt prot [299aa] cyclic nucleotide gated channel beta 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 96 3 C cysteine 1.3 16 2 D aspartate 4.9 61 2 E glutamate 12.3 154 15 F phenylalanine 2.2 28 2 G glycine 5.4 68 3 H histidine 1.6 20 2 I isoleucine 3.4 42 2 K lysine 6.4 80 2 L leucine 8.9 111 3 M methionine 2.6 32 1 N asparagine 2.5 31 2 P proline 9.6 120 3 Q glutamine 4.4 55 2 R arginine 4.4 55 2 S serine 6.6 82 2 T threonine 5.0 62 2 V valine 6.8 85 2 W tryptophan 1.6 20 1 Y tyrosine 2.6 33 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cyclic nucleotide gated channel beta 1 isoform a [H... CNGB3 0.279 cyclic nucleotide gated channel beta 3 CNGB1 0.228 cyclic nucleotide gated channel beta 1 isoform b [H... CNGA3 0.115 cyclic nucleotide gated channel alpha 3 isoform 2 [... CNGA3 0.115 cyclic nucleotide gated channel alpha 3 isoform 1 [Ho... CNGA1 0.115 cyclic nucleotide gated channel alpha 1 isoform 1 [... CNGA1 0.115 cyclic nucleotide gated channel alpha 1 isoform 2 [H... CNGA2 0.107 cyclic nucleotide gated channel alpha 2 CNGA4 0.096 cyclic nucleotide gated channel alpha 4 HCN2 0.053 hyperpolarization activated cyclic nucleotide-gated... HCN4 0.052 hyperpolarization activated cyclic nucleotide-gated p... HCN1 0.052 hyperpolarization activated cyclic nucleotide-gated... HCN3 0.050 hyperpolarization activated cyclic nucleotide-gated ... KCNH1 0.035 potassium voltage-gated channel, subfamily H, member ... KCNH4 0.035 potassium voltage-gated channel, subfamily H, member ... KCNH5 0.033 potassium voltage-gated channel, subfamily H, member... KCNH5 0.033 potassium voltage-gated channel, subfamily H, member... KCNH1 0.031 potassium voltage-gated channel, subfamily H, member... KCNH5 0.029 potassium voltage-gated channel, subfamily H, member... KCNH2 0.029 voltage-gated potassium channel, subfamily H, member... KCNH2 0.029 voltage-gated potassium channel, subfamily H, member ... KCNH8 0.029 potassium voltage-gated channel, subfamily H, member... KCNH7 0.028 potassium voltage-gated channel, subfamily H, member... KCNH6 0.027 potassium voltage-gated channel, subfamily H, member... KCNH3 0.026 potassium voltage-gated channel, subfamily H (eag-re... KCNH2 0.024 voltage-gated potassium channel, subfamily H, member... PELP1 0.024 proline, glutamic acid and leucine rich protein 1 [... KCNH6 0.024 potassium voltage-gated channel, subfamily H, member... NEFH 0.022 neurofilament, heavy polypeptide 200kDa RP1L1 0.022 retinitis pigmentosa 1-like 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.