Guide to the Human Genome
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Name: KCNH7 Sequence: fasta or formatted (1196aa) NCBI GI: 27886653
Description:

potassium voltage-gated channel, subfamily H, member 7 isoform 1

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [732aa] potassium voltage-gated channel, subfamily H, member 7 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         61           2
 C cysteine            1.9         23           1
 D aspartate           6.1         73           2
 E glutamate           5.6         67           2
 F phenylalanine       4.3         52           2
 G glycine             4.9         59           1
 H histidine           3.2         38           1
 I isoleucine          6.8         81           2
 K lysine              6.3         75           2
 L leucine             9.8        117           3
 M methionine          2.2         26           2
 N asparagine          4.4         53           1
 P proline             5.0         60           2
 Q glutamine           4.0         48           2
 R arginine            5.5         66           3
 S serine             10.1        121           3
 T threonine           5.6         67           3
 V valine              5.4         64           3
 W tryptophan          0.8         10           1
 Y tyrosine            2.9         35           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium voltage-gated channel, subfamily H, member... 
KCNH7                 0.592   potassium voltage-gated channel, subfamily H, member...
KCNH2                 0.508   voltage-gated potassium channel, subfamily H, member ...
KCNH2                 0.441   voltage-gated potassium channel, subfamily H, member...
KCNH6                 0.375   potassium voltage-gated channel, subfamily H, member...
KCNH2                 0.369   voltage-gated potassium channel, subfamily H, member...
KCNH6                 0.320   potassium voltage-gated channel, subfamily H, member...
KCNH8                 0.200   potassium voltage-gated channel, subfamily H, member...
KCNH1                 0.188   potassium voltage-gated channel, subfamily H, member ...
KCNH5                 0.187   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.187   potassium voltage-gated channel, subfamily H, member...
KCNH1                 0.184   potassium voltage-gated channel, subfamily H, member...
KCNH4                 0.180   potassium voltage-gated channel, subfamily H, member ...
KCNH3                 0.167   potassium voltage-gated channel, subfamily H (eag-re...
KCNH5                 0.161   potassium voltage-gated channel, subfamily H, member...
HCN4                  0.064   hyperpolarization activated cyclic nucleotide-gated p...
HCN2                  0.062   hyperpolarization activated cyclic nucleotide-gated...
HCN1                  0.061   hyperpolarization activated cyclic nucleotide-gated...
CNGA3                 0.058   cyclic nucleotide gated channel alpha 3 isoform 2 [...
CNGA3                 0.058   cyclic nucleotide gated channel alpha 3 isoform 1 [Ho...
CNGA1                 0.058   cyclic nucleotide gated channel alpha 1 isoform 1 [...
CNGA1                 0.058   cyclic nucleotide gated channel alpha 1 isoform 2 [H...
HCN3                  0.055   hyperpolarization activated cyclic nucleotide-gated ...
CNGA2                 0.054   cyclic nucleotide gated channel alpha 2 
CNGA4                 0.050   cyclic nucleotide gated channel alpha 4 
CNGB3                 0.032   cyclic nucleotide gated channel beta 3 
CNGB1                 0.030   cyclic nucleotide gated channel beta 1 isoform a [H...
KCNK17                0.008   potassium channel, subfamily K, member 17 isoform 2...
KCNK17                0.008   potassium channel, subfamily K, member 17 isoform 1 ...
KCNQ3                 0.006   potassium voltage-gated channel KQT-like protein 3 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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