Guide to the Human Genome
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Name: KCNK2 Sequence: fasta or formatted (411aa) NCBI GI: 14589851
Description:

potassium channel, subfamily K, member 2 isoform b

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [426aa] potassium channel, subfamily K, member 2 isoform c
alt prot [422aa] potassium channel, subfamily K, member 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         32           2
 C cysteine            1.2          5           1
 D aspartate           3.4         14           1
 E glutamate           5.6         23           2
 F phenylalanine       6.1         25           3
 G glycine             6.8         28           2
 H histidine           1.9          8           1
 I isoleucine         11.2         46           2
 K lysine              5.6         23           2
 L leucine             9.5         39           2
 M methionine          0.7          3           1
 N asparagine          3.4         14           1
 P proline             3.4         14           2
 Q glutamine           3.2         13           2
 R arginine            3.6         15           3
 S serine              6.8         28           2
 T threonine           8.0         33           2
 V valine              7.5         31           3
 W tryptophan          1.9          8           1
 Y tyrosine            2.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel, subfamily K, member 2 isoform b [... 
KCNK2                 0.999   potassium channel, subfamily K, member 2 isoform a [...
KCNK2                 0.999   potassium channel, subfamily K, member 2 isoform c ...
KCNK10                0.576   potassium channel, subfamily K, member 10 isoform 3 ...
KCNK10                0.576   potassium channel, subfamily K, member 10 isoform 2 ...
KCNK10                0.576   potassium channel, subfamily K, member 10 isoform 1 ...
KCNK4                 0.366   TRAAK 
KCNK16                0.215   potassium channel, subfamily K, member 16 isoform 3...
KCNK16                0.215   potassium channel, subfamily K, member 16 isoform 2 ...
KCNK16                0.193   potassium channel, subfamily K, member 16 isoform 4...
KCNK16                0.193   potassium channel, subfamily K, member 16 isoform 1...
KCNK5                 0.174   potassium channel, subfamily K, member 5 
KCNK17                0.159   potassium channel, subfamily K, member 17 isoform 1 ...
KCNK1                 0.152   potassium channel, subfamily K, member 1 
KCNK3                 0.140   potassium channel, subfamily K, member 3 
KCNK6                 0.139   potassium channel, subfamily K, member 6 
KCNK17                0.136   potassium channel, subfamily K, member 17 isoform 2...
KCNK15                0.133   potassium family, subfamily K, member 15 
KCNK9                 0.127   potassium channel, subfamily K, member 9 
KCNK7                 0.108   potassium channel, subfamily K, member 7 isoform C [H...
KCNK7                 0.108   potassium channel, subfamily K, member 7 isoform A [...
KCNK7                 0.108   potassium channel, subfamily K, member 7 isoform B [...
KCNK7                 0.108   potassium channel, subfamily K, member 7 isoform B [...
KCNK12                0.105   potassium channel, subfamily K, member 12 
KCNK13                0.098   potassium channel, subfamily K, member 13 
KCNK18                0.053   potassium channel, subfamily K, member 18 
KCNH5                 0.024   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.024   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.024   potassium voltage-gated channel, subfamily H, member...
KCNH1                 0.020   potassium voltage-gated channel, subfamily H, member ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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