Guide to the Human Genome
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Name: KCNK17 Sequence: fasta or formatted (271aa) NCBI GI: 205361107
Description:

potassium channel, subfamily K, member 17 isoform 2

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [332aa] potassium channel, subfamily K, member 17 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         22           2
 C cysteine            1.5          4           1
 D aspartate           3.7         10           1
 E glutamate           2.6          7           1
 F phenylalanine       5.9         16           3
 G glycine            10.0         27           2
 H histidine           1.8          5           1
 I isoleucine          3.0          8           1
 K lysine              2.2          6           1
 L leucine            15.9         43           4
 M methionine          1.8          5           1
 N asparagine          3.3          9           1
 P proline             3.7         10           2
 Q glutamine           3.0          8           2
 R arginine            7.0         19           1
 S serine              8.9         24           2
 T threonine           6.3         17           2
 V valine              5.2         14           2
 W tryptophan          3.0          8           1
 Y tyrosine            3.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel, subfamily K, member 17 isoform 2... 
KCNK17                0.837   potassium channel, subfamily K, member 17 isoform 1 ...
KCNK16                0.317   potassium channel, subfamily K, member 16 isoform 3...
KCNK16                0.317   potassium channel, subfamily K, member 16 isoform 2 ...
KCNK16                0.315   potassium channel, subfamily K, member 16 isoform 4...
KCNK16                0.315   potassium channel, subfamily K, member 16 isoform 1...
KCNK4                 0.228   TRAAK 
KCNK5                 0.220   potassium channel, subfamily K, member 5 
KCNK2                 0.203   potassium channel, subfamily K, member 2 isoform b [...
KCNK2                 0.203   potassium channel, subfamily K, member 2 isoform c ...
KCNK2                 0.203   potassium channel, subfamily K, member 2 isoform a [...
KCNK10                0.188   potassium channel, subfamily K, member 10 isoform 3 ...
KCNK10                0.188   potassium channel, subfamily K, member 10 isoform 2 ...
KCNK10                0.188   potassium channel, subfamily K, member 10 isoform 1 ...
KCNK6                 0.175   potassium channel, subfamily K, member 6 
KCNK15                0.165   potassium family, subfamily K, member 15 
KCNK3                 0.161   potassium channel, subfamily K, member 3 
KCNK1                 0.157   potassium channel, subfamily K, member 1 
KCNK9                 0.144   potassium channel, subfamily K, member 9 
KCNK7                 0.127   potassium channel, subfamily K, member 7 isoform C [H...
KCNK7                 0.127   potassium channel, subfamily K, member 7 isoform A [...
KCNK7                 0.127   potassium channel, subfamily K, member 7 isoform B [...
KCNK7                 0.127   potassium channel, subfamily K, member 7 isoform B [...
KCNK13                0.102   potassium channel, subfamily K, member 13 
KCNK12                0.097   potassium channel, subfamily K, member 12 
KCNK18                0.046   potassium channel, subfamily K, member 18 
KCNH8                 0.038   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.038   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.038   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.038   potassium voltage-gated channel, subfamily H, member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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