TRIM59 24310

Name: TRIM59	Sequence: fasta or formatted (403aa)		NCBI GI: 27436877
Description: tripartite motif-containing 59		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.2 9 1 C cysteine 3.5 14 1 D aspartate 3.7 15 2 E glutamate 9.2 37 3 F phenylalanine 3.7 15 2 G glycine 2.2 9 1 H histidine 4.0 16 2 I isoleucine 9.4 38 2 K lysine 8.2 33 3 L leucine 12.4 50 2 M methionine 1.7 7 1 N asparagine 3.7 15 1 P proline 5.5 22 1 Q glutamine 6.0 24 2 R arginine 3.5 14 1 S serine 6.5 26 1 T threonine 4.7 19 1 V valine 5.7 23 3 W tryptophan 1.5 6 1 Y tyrosine 2.7 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 59 TRIM13 0.230 ret finger protein 2 isoform 2 TRIM13 0.230 ret finger protein 2 isoform 1 TRIM13 0.230 ret finger protein 2 isoform 1 TRIM13 0.230 ret finger protein 2 isoform 1 TRIM50 0.103 tripartite motif protein 50A TRIM63 0.095 muscle specific ring finger protein 1 TRIM11 0.090 tripartite motif-containing 11 TRIM54 0.088 ring finger protein 30 isoform 2 TRIM55 0.084 tripartite motif-containing 55 isoform 3 TRIM55 0.084 tripartite motif-containing 55 isoform 1 TRIM55 0.084 tripartite motif-containing 55 isoform 2 TRIM73 0.083 tripartite motif-containing 73 TRIM74 0.080 tripartite motif-containing 74 TRIM3 0.080 tripartite motif-containing 3 TRIM3 0.080 tripartite motif-containing 3 TRIM54 0.079 ring finger protein 30 isoform 1 TRIM55 0.076 tripartite motif-containing 55 isoform 4 TRIM4 0.075 tripartite motif protein TRIM4 isoform beta TRIM39 0.075 tripartite motif-containing 39 isoform 2 TRIM39 0.071 tripartite motif-containing 39 isoform 1 MID2 0.071 midline 2 isoform 2 MID2 0.071 midline 2 isoform 1 TRIM4 0.070 tripartite motif protein TRIM4 isoform alpha TRIM72 0.070 tripartite motif-containing 72 TRIM31 0.069 tripartite motif protein 31 TRIM26 0.068 tripartite motif-containing 26 TRIM17 0.068 tripartite motif-containing 17 isoform 3 TRIM17 0.068 tripartite motif-containing 17 isoform 1 TRIM17 0.068 tripartite motif-containing 17 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.