TRIM3 25834

Name: TRIM3	Sequence: fasta or formatted (744aa)		NCBI GI: 32454739
Description: tripartite motif-containing 3		Referenced in: Tripartite Motif Family
Other entries for this name: alt mRNA [744aa] tripartite motif-containing 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 63 2 C cysteine 2.6 19 2 D aspartate 4.7 35 2 E glutamate 6.0 45 1 F phenylalanine 4.0 30 2 G glycine 9.4 70 2 H histidine 2.8 21 1 I isoleucine 3.2 24 2 K lysine 4.0 30 1 L leucine 9.0 67 3 M methionine 1.2 9 1 N asparagine 3.8 28 2 P proline 5.5 41 2 Q glutamine 6.0 45 2 R arginine 7.1 53 2 S serine 7.0 52 2 T threonine 4.4 33 2 V valine 8.6 64 3 W tryptophan 0.3 2 1 Y tyrosine 1.7 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 3 TRIM3 1.000 tripartite motif-containing 3 TRIM2 0.685 tripartite motif-containing 2 isoform 2 TRIM2 0.685 tripartite motif-containing 2 isoform 1 TRIM71 0.201 tripartite motif-containing 71 TRIM45 0.088 tripartite motif-containing 45 isoform 1 TRIM56 0.084 tripartite motif-containing 56 TRIM45 0.077 tripartite motif-containing 45 isoform 2 TRIM54 0.054 ring finger protein 30 isoform 2 TRIM33 0.045 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.045 tripartite motif-containing 33 protein isoform alpha... TRIM63 0.044 muscle specific ring finger protein 1 TRIM59 0.044 tripartite motif-containing 59 TRIM55 0.043 tripartite motif-containing 55 isoform 3 TRIM55 0.043 tripartite motif-containing 55 isoform 1 TRIM55 0.043 tripartite motif-containing 55 isoform 2 TRIM65 0.042 tripartite motif-containing 65 TRIM54 0.042 ring finger protein 30 isoform 1 TRIM24 0.041 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.041 transcriptional intermediary factor 1 alpha isoform ... TRIM39 0.039 tripartite motif-containing 39 isoform 2 TRIM39 0.039 tripartite motif-containing 39 isoform 1 TRIM13 0.039 ret finger protein 2 isoform 2 TRIM13 0.038 ret finger protein 2 isoform 1 TRIM13 0.038 ret finger protein 2 isoform 1 TRIM13 0.038 ret finger protein 2 isoform 1 TRIM28 0.037 tripartite motif-containing 28 protein TRIM62 0.035 tripartite motif-containing 62 TRIM23 0.033 ADP-ribosylation factor domain protein 1 isoform gam... TRIM23 0.033 ADP-ribosylation factor domain protein 1 isoform bet... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.