TNRC6B 23621

Name: TNRC6B	Sequence: fasta or formatted (1833aa)		NCBI GI: 241982729
Description: trinucleotide repeat containing 6B isoform 1		Referenced in: Additional Structural Proteins
Other entries for this name: alt prot [1723aa] trinucleotide repeat containing 6B isoform 2 alt prot [1029aa] trinucleotide repeat containing 6B isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 109 3 C cysteine 0.8 15 1 D aspartate 4.7 86 2 E glutamate 4.3 78 4 F phenylalanine 1.6 29 1 G glycine 11.8 216 3 H histidine 1.5 27 1 I isoleucine 1.9 34 2 K lysine 5.2 96 4 L leucine 5.5 100 3 M methionine 2.0 37 2 N asparagine 7.6 140 3 P proline 9.8 179 6 Q glutamine 6.8 124 8 R arginine 3.2 58 2 S serine 13.5 247 4 T threonine 6.3 115 2 V valine 3.5 64 2 W tryptophan 3.4 62 1 Y tyrosine 0.9 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 trinucleotide repeat containing 6B isoform 1 TNRC6B 0.855 trinucleotide repeat containing 6B isoform 2 TNRC6B 0.423 trinucleotide repeat containing 6B isoform 3 TNRC6A 0.281 trinucleotide repeat containing 6A TNRC6C 0.234 trinucleotide repeat containing 6C isoform 1 TNRC6C 0.224 trinucleotide repeat containing 6C isoform 2 DSPP 0.020 dentin sialophosphoprotein preproprotein HRNR 0.018 hornerin LOC100292655 0.015 PREDICTED: similar to armadillo repeat containing, ... FLG2 0.013 filaggrin family member 2 ARID1B 0.012 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1B 0.012 AT rich interactive domain 1B (SWI1-like) isoform 3 ... LOC100133915 0.011 PREDICTED: hypothetical protein MUC21 0.011 mucin 21 FOXP2 0.011 forkhead box P2 isoform I FLG 0.010 filaggrin FOXP2 0.010 forkhead box P2 isoform II FOXP2 0.010 forkhead box P2 isoform III FGA 0.010 fibrinogen, alpha polypeptide isoform alpha prepropr... FGA 0.010 fibrinogen, alpha polypeptide isoform alpha-E preprop... ARID1B 0.010 AT rich interactive domain 1B (SWI1-like) isoform 2 ... PRB1 0.009 proline-rich protein BstNI subfamily 1 isoform 1 pre... MED12 0.009 mediator complex subunit 12 PRB2 0.009 proline-rich protein BstNI subfamily 2 MLL2 0.009 myeloid/lymphoid or mixed-lineage leukemia 2 HNRNPUL1 0.009 heterogeneous nuclear ribonucleoprotein U-like 1 iso... HNRNPUL1 0.009 heterogeneous nuclear ribonucleoprotein U-like 1 iso... IRS4 0.009 insulin receptor substrate 4 MAML2 0.009 mastermind-like 2 PRB4 0.008 proline-rich protein BstNI subfamily 4 precursor [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.