Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: HNRNPUL1 Sequence: fasta or formatted (756aa) NCBI GI: 21536320
Description:

heterogeneous nuclear ribonucleoprotein U-like 1 isoform d

Referenced in:

hnRNP
Nucleus and Nucleolus

Other entries for this name:
alt prot [856aa] heterogeneous nuclear ribonucleoprotein U-like 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         42           2
 C cysteine            1.3         10           1
 D aspartate           4.5         34           2
 E glutamate           6.0         45           2
 F phenylalanine       3.8         29           1
 G glycine            10.8         82           5
 H histidine           1.1          8           1
 I isoleucine          3.3         25           1
 K lysine              4.5         34           2
 L leucine             4.2         32           1
 M methionine          1.7         13           2
 N asparagine          6.7         51           3
 P proline            10.2         77           9
 Q glutamine           7.4         56           3
 R arginine            7.5         57           2
 S serine              6.2         47           2
 T threonine           4.5         34           2
 V valine              3.4         26           2
 W tryptophan          1.1          8           1
 Y tyrosine            6.1         46           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heterogeneous nuclear ribonucleoprotein U-like 1 iso... 
HNRNPUL1              1.000   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
HNRNPU                0.353   heterogeneous nuclear ribonucleoprotein U isoform b ...
HNRNPU                0.353   heterogeneous nuclear ribonucleoprotein U isoform a ...
HNRNPUL2              0.285   heterogeneous nuclear ribonucleoprotein U-like 2 [H...
DDX1                  0.055   DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 
SFPQ                  0.047   splicing factor proline/glutamine rich (polypyrimidin...
IRS4                  0.032   insulin receptor substrate 4 
RAPH1                 0.031   Ras association and pleckstrin homology domains 1 is...
WASL                  0.029   Wiskott-Aldrich syndrome gene-like protein 
WIPF1                 0.028   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.028   WAS/WASL interacting protein family, member 1 
ILF3                  0.028   interleukin enhancer binding factor 3 isoform d [Ho...
ILF3                  0.028   interleukin enhancer binding factor 3 isoform a [Hom...
SF1                   0.028   splicing factor 1 isoform 1 
PRB2                  0.028   proline-rich protein BstNI subfamily 2 
GRINA                 0.028   glutamate receptor, ionotropic, N-methyl D-aspartate...
GRINA                 0.028   glutamate receptor, ionotropic, N-methyl D-aspartate...
HNRNPA2B1             0.027   heterogeneous nuclear ribonucleoprotein A2/B1 isofor...
HNRNPA2B1             0.027   heterogeneous nuclear ribonucleoprotein A2/B1 isoform...
CCNK                  0.027   cyclin K isoform 1 
PCLO                  0.027   piccolo isoform 2 
PCLO                  0.027   piccolo isoform 1 
PRB4                  0.026   proline-rich protein BstNI subfamily 4 precursor [Ho...
CRTC1                 0.025   mucoepidermoid carcinoma translocated 1 isoform 3 [...
CRTC1                 0.025   mucoepidermoid carcinoma translocated 1 isoform 1 [...
YLPM1                 0.025   YLP motif containing 1 
ATN1                  0.025   atrophin-1 
ATN1                  0.025   atrophin-1 
FOXJ2                 0.025   forkhead box J2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press