TNRC6A 1894

Name: TNRC6A	Sequence: fasta or formatted (1962aa)		NCBI GI: 116805348
Description: trinucleotide repeat containing 6A		Referenced in: Additional Structural Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 97 3 C cysteine 0.7 14 1 D aspartate 4.0 78 2 E glutamate 4.9 96 4 F phenylalanine 1.5 30 2 G glycine 10.1 198 4 H histidine 1.5 30 1 I isoleucine 2.8 54 2 K lysine 5.0 98 5 L leucine 5.8 113 2 M methionine 2.2 43 2 N asparagine 8.5 167 3 P proline 7.9 155 3 Q glutamine 7.5 147 8 R arginine 3.5 69 3 S serine 15.1 297 4 T threonine 6.1 119 2 V valine 4.0 78 2 W tryptophan 3.1 61 1 Y tyrosine 0.9 18 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 trinucleotide repeat containing 6A TNRC6C 0.294 trinucleotide repeat containing 6C isoform 1 TNRC6C 0.284 trinucleotide repeat containing 6C isoform 2 TNRC6B 0.267 trinucleotide repeat containing 6B isoform 1 TNRC6B 0.209 trinucleotide repeat containing 6B isoform 2 TNRC6B 0.144 trinucleotide repeat containing 6B isoform 3 DSPP 0.022 dentin sialophosphoprotein preproprotein HRNR 0.017 hornerin FLG 0.013 filaggrin LOC100133915 0.012 PREDICTED: hypothetical protein LOC729792 0.012 PREDICTED: hypothetical protein LOC729792 0.012 PREDICTED: hypothetical protein LOC729792 0.012 PREDICTED: hypothetical protein LOC100294501 0.012 PREDICTED: hypothetical protein LOC100294238 0.012 PREDICTED: hypothetical protein LOC100294204 0.012 PREDICTED: hypothetical protein LOC100294136 0.012 PREDICTED: hypothetical protein LOC100294091 0.012 PREDICTED: hypothetical protein LOC730401 0.012 PREDICTED: hypothetical protein LOC100294249 0.012 PREDICTED: hypothetical protein XP_002344067 MAML2 0.012 mastermind-like 2 FLG2 0.011 filaggrin family member 2 PNN 0.011 pinin, desmosome associated protein NUP214 0.011 nucleoporin 214kDa MUC21 0.010 mucin 21 LOC100292655 0.009 PREDICTED: similar to armadillo repeat containing, ... MED12 0.009 mediator complex subunit 12 NCOA6 0.008 nuclear receptor coactivator 6 FOXP2 0.008 forkhead box P2 isoform I FOXP2 0.008 forkhead box P2 isoform III Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.