TNRC6B 34742

Name: TNRC6B	Sequence: fasta or formatted (1029aa)		NCBI GI: 67782330
Description: trinucleotide repeat containing 6B isoform 3		Referenced in: Additional Structural Proteins
Other entries for this name: alt prot [1723aa] trinucleotide repeat containing 6B isoform 2 alt prot [1833aa] trinucleotide repeat containing 6B isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 68 2 C cysteine 0.7 7 1 D aspartate 4.4 45 2 E glutamate 4.2 43 4 F phenylalanine 2.1 22 1 G glycine 10.6 109 3 H histidine 2.0 21 1 I isoleucine 2.0 21 2 K lysine 5.2 54 4 L leucine 7.1 73 3 M methionine 2.8 29 2 N asparagine 5.2 54 2 P proline 10.8 111 4 Q glutamine 7.5 77 8 R arginine 3.1 32 1 S serine 11.8 121 3 T threonine 6.3 65 2 V valine 4.1 42 1 W tryptophan 2.3 24 1 Y tyrosine 1.1 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 trinucleotide repeat containing 6B isoform 3 TNRC6B 0.791 trinucleotide repeat containing 6B isoform 1 TNRC6B 0.776 trinucleotide repeat containing 6B isoform 2 TNRC6A 0.275 trinucleotide repeat containing 6A TNRC6C 0.260 trinucleotide repeat containing 6C isoform 1 TNRC6C 0.244 trinucleotide repeat containing 6C isoform 2 FOXP2 0.019 forkhead box P2 isoform I FOXP2 0.018 forkhead box P2 isoform II MED15 0.018 mediator complex subunit 15 isoform a MED15 0.018 mediator complex subunit 15 isoform b FOXP2 0.018 forkhead box P2 isoform III MLL2 0.016 myeloid/lymphoid or mixed-lineage leukemia 2 MLL4 0.016 myeloid/lymphoid or mixed-lineage leukemia 4 PAXIP1 0.014 PAX interacting protein 1 TOX3 0.014 TOX high mobility group box family member 3 isoform... TOX3 0.014 TOX high mobility group box family member 3 isoform... FOXP1 0.013 forkhead box P1 isoform 1 MAML2 0.013 mastermind-like 2 MED12 0.013 mediator complex subunit 12 TBP 0.012 TATA box binding protein ATN1 0.012 atrophin-1 ATN1 0.012 atrophin-1 NCOA3 0.012 nuclear receptor coactivator 3 isoform b ZNF853 0.012 zinc finger protein 853 ZNF207 0.012 zinc finger protein 207 isoform a LOC100292655 0.011 PREDICTED: similar to armadillo repeat containing, ... ZFHX3 0.011 AT-binding transcription factor 1 NCOA6 0.011 nuclear receptor coactivator 6 DAAM1 0.011 dishevelled-associated activator of morphogenesis 1 ... NCOA3 0.011 nuclear receptor coactivator 3 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.