Guide to the Human Genome
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Name: LOC100292655 Sequence: fasta or formatted (2382aa) NCBI GI: 239757861
Description:

PREDICTED: similar to armadillo repeat containing, X-linked 4

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.2        314           3
 C cysteine            1.3         30           1
 D aspartate           4.2         99           2
 E glutamate           7.0        167           2
 F phenylalanine       1.5         36           1
 G glycine            13.1        311           3
 H histidine           0.8         19           1
 I isoleucine          3.1         75           2
 K lysine              6.0        143           2
 L leucine             4.1         98           3
 M methionine          2.0         48           1
 N asparagine          4.7        111           2
 P proline             4.2         99           3
 Q glutamine           5.0        120           1
 R arginine            4.2        101           2
 S serine              9.5        226           2
 T threonine           6.0        142           2
 V valine              6.8        162           2
 W tryptophan          2.4         57           1
 Y tyrosine            1.0         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to armadillo repeat containing, ... 
GPRASP1               0.049   G protein-coupled receptor associated sorting prote...
GPRASP1               0.049   G protein-coupled receptor associated sorting prote...
GPRASP1               0.049   G protein-coupled receptor associated sorting prote...
ARMCX3                0.045   armadillo repeat containing, X-linked 3 
ARMCX3                0.045   armadillo repeat containing, X-linked 3 
ARMCX3                0.045   armadillo repeat containing, X-linked 3 
ARMCX1                0.042   armadillo repeat containing, X-linked 1 
ARMCX5                0.041   armadillo repeat containing, X-linked 5 
GPRASP2               0.041   G protein-coupled receptor associated sorting protei...
GPRASP2               0.041   G protein-coupled receptor associated sorting protei...
ARMC10                0.038   SVH protein isoform b 
ARMC10                0.038   SVH protein isoform a 
ARMCX2                0.038   ALEX2 protein 
ARMCX2                0.038   ALEX2 protein 
BHLHB9                0.033   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.033   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.033   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.033   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.033   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.033   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.033   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.033   basic helix-loop-helix domain containing, class B, 9...
LOC389137             0.031   PREDICTED: similar to SVH protein isoform 1 
ARMC10                0.030   SVH protein isoform e 
LOC389137             0.030   PREDICTED: similar to SVH protein isoform 1 
LOC389137             0.030   PREDICTED: similar to SVH protein isoform 2 
LOC389137             0.020   PREDICTED: similar to SVH protein isoform 2 
LOC389137             0.020   PREDICTED: similar to SVH protein isoform 2 
LOC389137             0.020   PREDICTED: similar to SVH protein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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