Guide to the Human Genome
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Name: FGA Sequence: fasta or formatted (866aa) NCBI GI: 4503689
Description:

fibrinogen, alpha polypeptide isoform alpha-E preproprotein

Referenced in:

Coagulation

Other entries for this name:
alt prot [644aa] fibrinogen, alpha polypeptide isoform alpha preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         37           2
 C cysteine            1.5         13           1
 D aspartate           5.8         50           2
 E glutamate           7.4         64           2
 F phenylalanine       3.3         29           2
 G glycine            11.2         97           3
 H histidine           2.2         19           2
 I isoleucine          3.0         26           1
 K lysine              5.0         43           1
 L leucine             5.7         49           2
 M methionine          1.7         15           1
 N asparagine          5.2         45           2
 P proline             4.7         41           2
 Q glutamine           3.5         30           2
 R arginine            6.2         54           2
 S serine             12.4        107           3
 T threonine           6.8         59           4
 V valine              5.2         45           2
 W tryptophan          2.2         19           2
 Y tyrosine            2.8         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibrinogen, alpha polypeptide isoform alpha-E preprop... 
FGA                   0.719   fibrinogen, alpha polypeptide isoform alpha prepropr...
FGB                   0.103   fibrinogen, beta chain preproprotein 
FGL1                  0.101   fibrinogen-like 1 precursor 
FGL1                  0.101   fibrinogen-like 1 precursor 
FGL1                  0.101   fibrinogen-like 1 precursor 
FGL1                  0.101   fibrinogen-like 1 precursor 
FGG                   0.101   fibrinogen, gamma chain isoform gamma-B precursor [H...
FGG                   0.101   fibrinogen, gamma chain isoform gamma-A precursor [H...
ANGPTL2               0.097   angiopoietin-like 2 precursor 
ANGPTL1               0.097   angiopoietin-like 1 precursor 
ANGPT4                0.091   angiopoietin 4 
ANGPTL7               0.088   angiopoietin-like 7 
ANGPTL6               0.088   angiopoietin-like 6 
FIBCD1                0.084   fibrinogen C domain containing 1 
FIBCD1                0.084   fibrinogen C domain containing 1 
ANGPT2                0.084   angiopoietin 2 isoform c precursor 
ANGPT2                0.084   angiopoietin 2 isoform b precursor 
ANGPT2                0.084   angiopoietin 2 isoform a precursor 
ANGPT1                0.084   angiopoietin 1 
FCN1                  0.082   ficolin 1 precursor 
FCN2                  0.080   ficolin 2 isoform b precursor 
FCN2                  0.080   ficolin 2 isoform a precursor 
FGL2                  0.080   fibrinogen-like 2 precursor 
MFAP4                 0.076   microfibrillar-associated protein 4 
TNXB                  0.076   tenascin XB isoform 2 
TNXB                  0.076   tenascin XB isoform 1 precursor 
FCN3                  0.075   ficolin 3 isoform 2 precursor 
FCN3                  0.075   ficolin 3 isoform 1 precursor 
TNN                   0.074   tenascin N 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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