LOC100293005 22578

Name: LOC100293005	Sequence: fasta or formatted (577aa)		NCBI GI: 239755873
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.5 72 3 C cysteine 2.4 14 2 D aspartate 1.9 11 2 E glutamate 4.9 28 2 F phenylalanine 2.1 12 1 G glycine 11.6 67 3 H histidine 3.6 21 1 I isoleucine 0.9 5 1 K lysine 2.4 14 1 L leucine 9.4 54 2 M methionine 1.2 7 1 N asparagine 1.6 9 1 P proline 10.2 59 3 Q glutamine 4.2 24 2 R arginine 9.9 57 3 S serine 9.9 57 3 T threonine 3.6 21 2 V valine 5.4 31 2 W tryptophan 2.1 12 1 Y tyrosine 0.3 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100289780 0.388 PREDICTED: hypothetical protein XP_002347375 LOC100289202 0.380 PREDICTED: hypothetical protein XP_002343213 COL5A1 0.020 alpha 1 type V collagen preproprotein COL1A1 0.019 alpha 1 type I collagen preproprotein SYN1 0.019 synapsin I isoform Ia SYN1 0.019 synapsin I isoform Ib LOC100128979 0.017 PREDICTED: hypothetical protein LOC100128979 0.017 PREDICTED: hypothetical protein LOC100290139 0.017 PREDICTED: hypothetical protein XP_002346782 LOC100288835 0.017 PREDICTED: hypothetical protein XP_002342616 LOC100128979 0.016 PREDICTED: hypothetical protein COL8A2 0.016 collagen, type VIII, alpha 2 COL5A2 0.016 alpha 2 type V collagen preproprotein COL11A1 0.015 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.015 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.015 alpha 1 type XI collagen isoform A preproprotein [Ho... COL18A1 0.015 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.015 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.015 alpha 1 type XVIII collagen isoform 1 precursor [Ho... LOC100289408 0.015 PREDICTED: hypothetical protein LOC100289408 0.015 PREDICTED: hypothetical protein XP_002344217 COL6A2 0.015 alpha 2 type VI collagen isoform 2C2a' precursor [H... COL6A2 0.015 alpha 2 type VI collagen isoform 2C2a precursor [Ho... COL6A2 0.015 alpha 2 type VI collagen isoform 2C2 precursor [Hom... COL3A1 0.015 collagen type III alpha 1 preproprotein LOC100128703 0.014 PREDICTED: hypothetical protein LOC100128703 0.014 PREDICTED: hypothetical protein LOC100128703 COL1A2 0.014 alpha 2 type I collagen LOC100127891 0.014 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.