Guide to the Human Genome
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Name: TLL2 Sequence: fasta or formatted (1015aa) NCBI GI: 6912724
Description:

tolloid-like 2

Referenced in:

Collagen

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         67           3
 C cysteine            3.8         39           2
 D aspartate           6.6         67           2
 E glutamate           7.5         76           3
 F phenylalanine       5.2         53           2
 G glycine             9.4         95           3
 H histidine           3.3         33           1
 I isoleucine          3.8         39           2
 K lysine              5.1         52           2
 L leucine             5.9         60           5
 M methionine          1.5         15           1
 N asparagine          3.3         34           2
 P proline             4.5         46           1
 Q glutamine           3.0         30           2
 R arginine            6.0         61           2
 S serine              7.4         75           3
 T threonine           6.0         61           2
 V valine              5.3         54           2
 W tryptophan          1.8         18           1
 Y tyrosine            3.9         40           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tolloid-like 2 
BMP1                  0.742   bone morphogenetic protein 1 isoform 3 precursor [Hom...
TLL1                  0.738   tolloid-like 1 
BMP1                  0.518   bone morphogenetic protein 1 isoform 1 precursor [Hom...
BMP1                  0.516   bone morphogenetic protein 1 isoform 2 precursor [Hom...
CUBN                  0.138   cubilin 
CDCP2                 0.094   CUB domain containing protein 2 
CSMD1                 0.089   CUB and Sushi multiple domains 1 
CSMD3                 0.089   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.089   CUB and Sushi multiple domains 3 isoform 3 
CSMD3                 0.089   CUB and Sushi multiple domains 3 isoform 1 
CSMD2                 0.085   CUB and Sushi multiple domains 2 
MASP1                 0.068   mannan-binding lectin serine protease 1 isoform 3 [H...
MASP1                 0.068   mannan-binding lectin serine protease 1 isoform 2 pr...
MASP1                 0.068   mannan-binding lectin serine protease 1 isoform 1 pr...
PCOLCE                0.068   procollagen C-endopeptidase enhancer 
MFRP                  0.066   membrane frizzled-related protein 
PCOLCE2               0.064   procollagen C-endopeptidase enhancer 2 
NRP2                  0.061   neuropilin 2 isoform 3 precursor 
NRP2                  0.061   neuropilin 2 isoform 5 precursor 
NRP2                  0.061   neuropilin 2 isoform 1 precursor 
NRP2                  0.061   neuropilin 2 isoform 6 precursor 
NRP2                  0.061   neuropilin 2 isoform 4 precursor 
NRP2                  0.061   neuropilin 2 isoform 2 precursor 
C1R                   0.058   complement component 1, r subcomponent 
LOC100291777          0.056   PREDICTED: similar to DMBT1 isoform 1 
LOC100291777          0.056   PREDICTED: similar to DMBT1 isoform 2 
DMBT1                 0.056   deleted in malignant brain tumors 1 isoform c precu...
DMBT1                 0.056   deleted in malignant brain tumors 1 isoform b precu...
DMBT1                 0.056   deleted in malignant brain tumors 1 isoform a precu...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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