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Search of human proteins with 239753062
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239753062 PREDICTED: hypothetical protein [Homo sapiens]
(811 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753062 PREDICTED: hypothetical protein [Homo sapiens] 1701 0.0
gi|239740980 PREDICTED: hypothetical protein XP_002344293 [Homo ... 1188 0.0
gi|169171899 PREDICTED: similar to hCG2014367 [Homo sapiens] 1129 0.0
gi|169171130 PREDICTED: hypothetical protein LOC100130600 [Homo ... 1125 0.0
gi|239509024 PREDICTED: similar to hCG2014367 [Homo sapiens] 1125 0.0
gi|169171432 PREDICTED: similar to hCG2014367 [Homo sapiens] 1122 0.0
gi|239747616 PREDICTED: similar to hCG1996386 [Homo sapiens] 563 e-160
gi|169162775 PREDICTED: similar to hCG1996386 [Homo sapiens] 563 e-160
gi|239742769 PREDICTED: hypothetical protein XP_002342619 [Homo ... 421 e-117
gi|112421108 capicua homolog [Homo sapiens] 211 2e-54
gi|169171742 PREDICTED: hypothetical protein LOC442676 [Homo sap... 163 7e-40
gi|169172340 PREDICTED: hypothetical protein LOC442676 [Homo sap... 163 7e-40
gi|169170016 PREDICTED: hypothetical protein LOC442676 [Homo sap... 161 2e-39
gi|239508816 PREDICTED: hypothetical protein LOC442676 [Homo sap... 161 2e-39
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 38 0.043
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 38 0.043
gi|217035121 HMG-BOX transcription factor BBX isoform 1 [Homo sa... 37 0.096
gi|18378731 HMG-BOX transcription factor BBX isoform 2 [Homo sap... 37 0.096
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 35 0.21
gi|239754458 PREDICTED: hypothetical protein [Homo sapiens] 35 0.28
gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo ... 35 0.28
gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo ... 35 0.28
gi|116256363 transmembrane protease, serine 13 [Homo sapiens] 35 0.28
gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo ... 35 0.36
gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo s... 35 0.36
gi|208022661 hypothetical protein LOC57701 [Homo sapiens] 35 0.36
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 34 0.62
gi|157785645 SPEG complex locus [Homo sapiens] 34 0.62
gi|4507831 Unc-51-like kinase 1 [Homo sapiens] 33 0.81
gi|169184624 PREDICTED: similar to synaptotagmin XV-b [Homo sapi... 33 1.1
>gi|239753062 PREDICTED: hypothetical protein [Homo sapiens]
Length = 811
Score = 1701 bits (4405), Expect = 0.0
Identities = 811/811 (100%), Positives = 811/811 (100%)
Query: 1 MGAACNGDSGQVDLQGAATRLWVTAGDEWDSLCGAGIDPSIFLPITPPGKRTVEAPDAMG 60
MGAACNGDSGQVDLQGAATRLWVTAGDEWDSLCGAGIDPSIFLPITPPGKRTVEAPDAMG
Sbjct: 1 MGAACNGDSGQVDLQGAATRLWVTAGDEWDSLCGAGIDPSIFLPITPPGKRTVEAPDAMG 60
Query: 61 RWGSAVLPPGSGTTNLQGAVPDQSVKVYVPTCALRWGLGWHLLVGQDTDPHSNTWNGEVA 120
RWGSAVLPPGSGTTNLQGAVPDQSVKVYVPTCALRWGLGWHLLVGQDTDPHSNTWNGEVA
Sbjct: 61 RWGSAVLPPGSGTTNLQGAVPDQSVKVYVPTCALRWGLGWHLLVGQDTDPHSNTWNGEVA 120
Query: 121 PLYIPCLSLRPVSTFVGIVQLRHCGNYLLRVNITMRAPVDITDVGMSWQGFAEAVPLLGK 180
PLYIPCLSLRPVSTFVGIVQLRHCGNYLLRVNITMRAPVDITDVGMSWQGFAEAVPLLGK
Sbjct: 121 PLYIPCLSLRPVSTFVGIVQLRHCGNYLLRVNITMRAPVDITDVGMSWQGFAEAVPLLGK 180
Query: 181 VVGDMSGASSLALGCPAAQPPWLRRGRGGVSPCQEPPARTKYSAPRPAFSEASRGVSMFV 240
VVGDMSGASSLALGCPAAQPPWLRRGRGGVSPCQEPPARTKYSAPRPAFSEASRGVSMFV
Sbjct: 181 VVGDMSGASSLALGCPAAQPPWLRRGRGGVSPCQEPPARTKYSAPRPAFSEASRGVSMFV 240
Query: 241 WRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQSLS 300
WRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQSLS
Sbjct: 241 WRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQSLS 300
Query: 301 ALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNRTISQM 360
ALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNRTISQM
Sbjct: 301 ALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNRTISQM 360
Query: 361 LSEQWYTLGPNEMQKYDLAFQECNKGSWEWSISEMGTATAPGVSSELLSVAAQTLQSSDT 420
LSEQWYTLGPNEMQKYDLAFQECNKGSWEWSISEMGTATAPGVSSELLSVAAQTLQSSDT
Sbjct: 361 LSEQWYTLGPNEMQKYDLAFQECNKGSWEWSISEMGTATAPGVSSELLSVAAQTLQSSDT 420
Query: 421 KEQLLWGRTAAHSQETWLSLAQAFSHSGVHSLDGREIDRQALQELTQVVSGTASYSGPKP 480
KEQLLWGRTAAHSQETWLSLAQAFSHSGVHSLDGREIDRQALQELTQVVSGTASYSGPKP
Sbjct: 421 KEQLLWGRTAAHSQETWLSLAQAFSHSGVHSLDGREIDRQALQELTQVVSGTASYSGPKP 480
Query: 481 STQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQDSRA 540
STQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQDSRA
Sbjct: 481 STQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQDSRA 540
Query: 541 GPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPRCKMRRCSSCSPKPNTPKCAMCDGDS 600
GPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPRCKMRRCSSCSPKPNTPKCAMCDGDS
Sbjct: 541 GPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPRCKMRRCSSCSPKPNTPKCAMCDGDS 600
Query: 601 FPFACTGGEAEDRLREPETEKALSSSLHATAALQAHYAHIFPSKVCSAPALTPSPVGFLT 660
FPFACTGGEAEDRLREPETEKALSSSLHATAALQAHYAHIFPSKVCSAPALTPSPVGFLT
Sbjct: 601 FPFACTGGEAEDRLREPETEKALSSSLHATAALQAHYAHIFPSKVCSAPALTPSPVGFLT 660
Query: 661 GPHLAQTLDAALVAPPLPLPESHAGGRPQRRSQDSQYPLRTWTVCGGSNGGQDGYLLPAV 720
GPHLAQTLDAALVAPPLPLPESHAGGRPQRRSQDSQYPLRTWTVCGGSNGGQDGYLLPAV
Sbjct: 661 GPHLAQTLDAALVAPPLPLPESHAGGRPQRRSQDSQYPLRTWTVCGGSNGGQDGYLLPAV 720
Query: 721 PGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGPQGGACGLGGVHAPL 780
PGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGPQGGACGLGGVHAPL
Sbjct: 721 PGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGPQGGACGLGGVHAPL 780
Query: 781 LSSEGLDSEHVDHGRYFSLCQKVAMTVIKPV 811
LSSEGLDSEHVDHGRYFSLCQKVAMTVIKPV
Sbjct: 781 LSSEGLDSEHVDHGRYFSLCQKVAMTVIKPV 811
>gi|239740980 PREDICTED: hypothetical protein XP_002344293 [Homo
sapiens]
Length = 616
Score = 1188 bits (3073), Expect = 0.0
Identities = 576/612 (94%), Positives = 585/612 (95%), Gaps = 2/612 (0%)
Query: 200 PPWLRRGRGGVSPCQEPPARTKYSAPRPAFSEASRGVSMFVWRNVEGHSVAVFPWYSIPF 259
PPWLRRGRGGVSPCQEPPARTK SAPRPAFSEASRGVSMFVWRNVEGHS AVF WYSIPF
Sbjct: 7 PPWLRRGRGGVSPCQEPPARTKCSAPRPAFSEASRGVSMFVWRNVEGHSAAVFSWYSIPF 66
Query: 260 LTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNK 319
LTPPCSH RPS LPVTQWPPTRENNLPSWQ LLMSVHQSLSALRKEQDSSSEKDGRSPNK
Sbjct: 67 LTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQSLSALRKEQDSSSEKDGRSPNK 126
Query: 320 WDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKYDLA 379
DKDHI WPMSG+H+LQQAAPGPG AHQGHPNQDNRT+SQMLSE+WYTLGPNEMQKY+LA
Sbjct: 127 SDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGPNEMQKYNLA 186
Query: 380 FQECNKGSWEWSISEMGTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQETWLS 439
FQECNKGSWE SISE GTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQ TWLS
Sbjct: 187 FQECNKGSWERSISETGTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQGTWLS 246
Query: 440 LAQAFSHSGVHSLDGREIDRQALQELTQVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVY 499
LAQAFSHSGVHSLDGREIDRQAL+ELTQVVSGTASYSGPKPSTQ+GAPGHFAAP G VY
Sbjct: 247 LAQAFSHSGVHSLDGREIDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAPGEG-VY 305
Query: 500 GPTLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQDSRAGPLRPLPLGMGAQGRLPRG 559
G TLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQ SRAGPLRP PLGMGAQGRLPRG
Sbjct: 306 GHTLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQRSRAGPLRPQPLGMGAQGRLPRG 365
Query: 560 NPTDMDPTLEDPTTPRCKMRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAEDRLREPET 619
NPTDMDPTLEDPT P+CK RRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAEDRLREPET
Sbjct: 366 NPTDMDPTLEDPTAPKCKTRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAEDRLREPET 425
Query: 620 EKALSSSLHATAALQAHYAHIFPSKVCSAPALTPSPVGFLTGPHLAQTLDAALVAPPLPL 679
EKALSSSLHATAALQAHYAHIFPSKVCSAPALTPSPVG LT PHLAQTLDAAL APPL L
Sbjct: 426 EKALSSSLHATAALQAHYAHIFPSKVCSAPALTPSPVGVLTAPHLAQTLDAALAAPPLLL 485
Query: 680 PESHAGGRPQRRSQDSQYPLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNC 739
PESHAGG+PQ RSQDSQYPLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNC
Sbjct: 486 PESHAGGQPQ-RSQDSQYPLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNC 544
Query: 740 GTFRAFHFSENSSCWGYKMECEEGLGPQGGACGLGGVHAPLLSSEGLDSEHVDHGRYFSL 799
GTFRAFHFSENSSCWGYKMECEEGLGPQGGACGLGGVHAPLLS EGLDSEHVD GRYFSL
Sbjct: 545 GTFRAFHFSENSSCWGYKMECEEGLGPQGGACGLGGVHAPLLSPEGLDSEHVDRGRYFSL 604
Query: 800 CQKVAMTVIKPV 811
CQKVAMTVIKPV
Sbjct: 605 CQKVAMTVIKPV 616
>gi|169171899 PREDICTED: similar to hCG2014367 [Homo sapiens]
Length = 594
Score = 1129 bits (2919), Expect = 0.0
Identities = 551/594 (92%), Positives = 562/594 (94%), Gaps = 5/594 (0%)
Query: 222 YSAPRP---AFSEASRGVSMFVWRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWP 278
Y A RP A SEAS GVSMFVWRNVE SVAVF WYS+PFLTPPCS++R S LPVTQWP
Sbjct: 2 YLAHRPLMSASSEASSGVSMFVWRNVEPCSVAVFSWYSVPFLTPPCSYVRSSNLPVTQWP 61
Query: 279 PTRENNLPSWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQA 338
PTR NLPS QLLLMSVHQSLSALRKEQDSSSEKDG SPNKWDKDHI WPMSG H+LQQA
Sbjct: 62 PTRAKNLPSQQLLLMSVHQSLSALRKEQDSSSEKDGCSPNKWDKDHIRWPMSGGHDLQQA 121
Query: 339 APGPGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKY-DLAFQECNKGSWEWSISEMGT 397
APGPGRAHQGHPNQDNRT+SQMLS++WYTLGPNE QKY DLAFQECNKGSWE ISE GT
Sbjct: 122 APGPGRAHQGHPNQDNRTVSQMLSKRWYTLGPNETQKYHDLAFQECNKGSWERRISETGT 181
Query: 398 ATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQETWLSLAQAFSHSGVHSLDGREI 457
ATAPGVSSELLSVAAQTLQSSDTKEQLLWGR AAHSQ TWLSLAQAFSHSGVHSLDGREI
Sbjct: 182 ATAPGVSSELLSVAAQTLQSSDTKEQLLWGRMAAHSQGTWLSLAQAFSHSGVHSLDGREI 241
Query: 458 DRQALQELTQVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTL 517
DRQAL+ELTQVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTL
Sbjct: 242 DRQALRELTQVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTL 301
Query: 518 APTSFLLGPGAFKAQESGQDSRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPRCK 577
APTSFLLGPGAF AQESGQ SRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTP+CK
Sbjct: 302 APTSFLLGPGAFNAQESGQGSRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPKCK 361
Query: 578 MRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAEDRLREPETEKALSSSLHATAALQAHY 637
MRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEA+DRLREPETEKALSSSLHATAALQAHY
Sbjct: 362 MRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAKDRLREPETEKALSSSLHATAALQAHY 421
Query: 638 AHIFPSKVCSAPALTPSPVGFLTGPHLAQTLDAALVAPPLPLPESHAGGRPQRRSQDSQY 697
AHIFPSKVCSAPALTPSPVG LT PHLAQTLDAAL APPLPLPESHAGG+PQ RSQDSQY
Sbjct: 422 AHIFPSKVCSAPALTPSPVGVLTAPHLAQTLDAALAAPPLPLPESHAGGQPQ-RSQDSQY 480
Query: 698 PLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYK 757
PLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYK
Sbjct: 481 PLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYK 540
Query: 758 MECEEGLGPQGGACGLGGVHAPLLSSEGLDSEHVDHGRYFSLCQKVAMTVIKPV 811
MECEEGLGPQGGACGLGGVHAPLLS EGLDSEHVDHGRYFSLCQKVAMTVIKPV
Sbjct: 541 MECEEGLGPQGGACGLGGVHAPLLSPEGLDSEHVDHGRYFSLCQKVAMTVIKPV 594
>gi|169171130 PREDICTED: hypothetical protein LOC100130600 [Homo
sapiens]
Length = 594
Score = 1125 bits (2911), Expect = 0.0
Identities = 550/594 (92%), Positives = 561/594 (94%), Gaps = 5/594 (0%)
Query: 222 YSAPRP---AFSEASRGVSMFVWRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWP 278
Y A RP A SEAS GVSMFVWRNVE SVAVF WYS+PFLTPPCS++R S LPVTQWP
Sbjct: 2 YLAHRPLMSASSEASSGVSMFVWRNVEPCSVAVFSWYSVPFLTPPCSYVRSSNLPVTQWP 61
Query: 279 PTRENNLPSWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQA 338
PTR NLPS QLLLMSVHQSLSALRKEQDSSSEKDG SPNKWDKDHI WPMSG H+LQQA
Sbjct: 62 PTRAKNLPSQQLLLMSVHQSLSALRKEQDSSSEKDGCSPNKWDKDHIRWPMSGGHDLQQA 121
Query: 339 APGPGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKY-DLAFQECNKGSWEWSISEMGT 397
APGPGRAHQGHPNQDNRT+SQMLS++WYTLGPNE QKY DLAFQECNKGSWE ISE GT
Sbjct: 122 APGPGRAHQGHPNQDNRTVSQMLSKRWYTLGPNETQKYHDLAFQECNKGSWERRISETGT 181
Query: 398 ATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQETWLSLAQAFSHSGVHSLDGREI 457
ATAPGVSSELLSVAAQTLQSSDTKEQLLWGR AAHSQ TWLSLAQAFSHSGVHSLDGREI
Sbjct: 182 ATAPGVSSELLSVAAQTLQSSDTKEQLLWGRMAAHSQGTWLSLAQAFSHSGVHSLDGREI 241
Query: 458 DRQALQELTQVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTL 517
DRQAL+ELTQVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTL
Sbjct: 242 DRQALRELTQVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTL 301
Query: 518 APTSFLLGPGAFKAQESGQDSRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPRCK 577
APTSFLLGPGAF AQESGQ SRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTP+CK
Sbjct: 302 APTSFLLGPGAFNAQESGQGSRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPKCK 361
Query: 578 MRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAEDRLREPETEKALSSSLHATAALQAHY 637
MRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEA+DRLREPETEKALSSSLHATAALQAHY
Sbjct: 362 MRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAKDRLREPETEKALSSSLHATAALQAHY 421
Query: 638 AHIFPSKVCSAPALTPSPVGFLTGPHLAQTLDAALVAPPLPLPESHAGGRPQRRSQDSQY 697
AHIFPSKVCSAPALTPSPVG LT PHLAQTLDAAL APPLPLPESHAGG+PQ RSQDSQY
Sbjct: 422 AHIFPSKVCSAPALTPSPVGVLTAPHLAQTLDAALAAPPLPLPESHAGGQPQ-RSQDSQY 480
Query: 698 PLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYK 757
PLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYK
Sbjct: 481 PLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYK 540
Query: 758 MECEEGLGPQGGACGLGGVHAPLLSSEGLDSEHVDHGRYFSLCQKVAMTVIKPV 811
MECEEGLGPQGGACGL GVHAPLLS EGLDSEHVDHGRYFSLCQKVAMTVIKPV
Sbjct: 541 MECEEGLGPQGGACGLRGVHAPLLSPEGLDSEHVDHGRYFSLCQKVAMTVIKPV 594
>gi|239509024 PREDICTED: similar to hCG2014367 [Homo sapiens]
Length = 594
Score = 1125 bits (2911), Expect = 0.0
Identities = 550/594 (92%), Positives = 561/594 (94%), Gaps = 5/594 (0%)
Query: 222 YSAPRP---AFSEASRGVSMFVWRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWP 278
Y A RP A SEAS GVSMFVWRNVE SVAVF WYS+PFLTPPCS++R S LPVTQWP
Sbjct: 2 YLAHRPLMSASSEASSGVSMFVWRNVEPCSVAVFSWYSVPFLTPPCSYVRSSNLPVTQWP 61
Query: 279 PTRENNLPSWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQA 338
PTR NLPS QLLLMSVHQSLSALRKEQDSSSEKDG SPNKWDKDHI WPMSG H+LQQA
Sbjct: 62 PTRAKNLPSQQLLLMSVHQSLSALRKEQDSSSEKDGCSPNKWDKDHIRWPMSGGHDLQQA 121
Query: 339 APGPGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKY-DLAFQECNKGSWEWSISEMGT 397
APGPGRAHQGHPNQDNRT+SQMLS++WYTLGPNE QKY DLAFQECNKGSWE ISE GT
Sbjct: 122 APGPGRAHQGHPNQDNRTVSQMLSKRWYTLGPNETQKYHDLAFQECNKGSWERRISETGT 181
Query: 398 ATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQETWLSLAQAFSHSGVHSLDGREI 457
ATAPGVSSELLSVAAQTLQSSDTKEQLLWGR AAHSQ TWLSLAQAFSHSGVHSLDGREI
Sbjct: 182 ATAPGVSSELLSVAAQTLQSSDTKEQLLWGRMAAHSQGTWLSLAQAFSHSGVHSLDGREI 241
Query: 458 DRQALQELTQVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTL 517
DRQAL+ELTQVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTL
Sbjct: 242 DRQALRELTQVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTL 301
Query: 518 APTSFLLGPGAFKAQESGQDSRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPRCK 577
APTSFLLGPGAF AQESGQ SRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTP+CK
Sbjct: 302 APTSFLLGPGAFNAQESGQGSRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPKCK 361
Query: 578 MRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAEDRLREPETEKALSSSLHATAALQAHY 637
MRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEA+DRLREPETEKALSSSLHATAALQAHY
Sbjct: 362 MRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAKDRLREPETEKALSSSLHATAALQAHY 421
Query: 638 AHIFPSKVCSAPALTPSPVGFLTGPHLAQTLDAALVAPPLPLPESHAGGRPQRRSQDSQY 697
AHIFPSKVCSAPALTPSPVG LT PHLAQTLDAAL APPLPLPESHAGG+PQ RSQDSQY
Sbjct: 422 AHIFPSKVCSAPALTPSPVGVLTAPHLAQTLDAALAAPPLPLPESHAGGQPQ-RSQDSQY 480
Query: 698 PLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYK 757
PLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYK
Sbjct: 481 PLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYK 540
Query: 758 MECEEGLGPQGGACGLGGVHAPLLSSEGLDSEHVDHGRYFSLCQKVAMTVIKPV 811
MECEEGLGPQGGACGL GVHAPLLS EGLDSEHVDHGRYFSLCQKVAMTVIKPV
Sbjct: 541 MECEEGLGPQGGACGLRGVHAPLLSPEGLDSEHVDHGRYFSLCQKVAMTVIKPV 594
>gi|169171432 PREDICTED: similar to hCG2014367 [Homo sapiens]
Length = 594
Score = 1122 bits (2903), Expect = 0.0
Identities = 549/594 (92%), Positives = 560/594 (94%), Gaps = 5/594 (0%)
Query: 222 YSAPRP---AFSEASRGVSMFVWRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWP 278
Y A RP A SEAS GVSMFVWRNVE SVAVF WYS+PFLTPPCS++R S LPVTQWP
Sbjct: 2 YLAHRPLMSASSEASSGVSMFVWRNVEPCSVAVFSWYSVPFLTPPCSYVRSSNLPVTQWP 61
Query: 279 PTRENNLPSWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQA 338
PTR NLPS QLLLMSVHQSLSALRKEQDSSSEKDG SPNKWDKDHI WPMSG H+LQQA
Sbjct: 62 PTRAKNLPSQQLLLMSVHQSLSALRKEQDSSSEKDGCSPNKWDKDHIRWPMSGGHDLQQA 121
Query: 339 APGPGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKY-DLAFQECNKGSWEWSISEMGT 397
APGPGRAHQGHPNQDNRT+SQMLS++WYTLGPNE QKY DLAFQECNKGSWE ISE GT
Sbjct: 122 APGPGRAHQGHPNQDNRTVSQMLSKRWYTLGPNETQKYHDLAFQECNKGSWERRISETGT 181
Query: 398 ATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQETWLSLAQAFSHSGVHSLDGREI 457
ATAPGVSSELLSVAAQTLQSSDTKEQLLWGR AAHSQ TWLSLAQAFSHSGVHSLDGREI
Sbjct: 182 ATAPGVSSELLSVAAQTLQSSDTKEQLLWGRMAAHSQGTWLSLAQAFSHSGVHSLDGREI 241
Query: 458 DRQALQELTQVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTL 517
DRQAL+ELTQVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTL
Sbjct: 242 DRQALRELTQVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTL 301
Query: 518 APTSFLLGPGAFKAQESGQDSRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPRCK 577
APTSFLLGPGAF AQESGQ SRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTP+CK
Sbjct: 302 APTSFLLGPGAFNAQESGQGSRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPKCK 361
Query: 578 MRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAEDRLREPETEKALSSSLHATAALQAHY 637
MRRCSSCSPKPNTPKCAMCDGDSFP ACTGGEA+DRLREPETEKALSSSLHATAALQAHY
Sbjct: 362 MRRCSSCSPKPNTPKCAMCDGDSFPSACTGGEAKDRLREPETEKALSSSLHATAALQAHY 421
Query: 638 AHIFPSKVCSAPALTPSPVGFLTGPHLAQTLDAALVAPPLPLPESHAGGRPQRRSQDSQY 697
AHIFPSKVCSAPALTPSPVG LT PHLAQTLDAAL APPLPLPESHAGG+PQ RSQDSQY
Sbjct: 422 AHIFPSKVCSAPALTPSPVGVLTAPHLAQTLDAALAAPPLPLPESHAGGQPQ-RSQDSQY 480
Query: 698 PLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYK 757
PLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYK
Sbjct: 481 PLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYK 540
Query: 758 MECEEGLGPQGGACGLGGVHAPLLSSEGLDSEHVDHGRYFSLCQKVAMTVIKPV 811
MECEEGLGPQGGACGL GVHAPLLS EGLDSEHVDHGRYFSLCQKVAMTVIKPV
Sbjct: 541 MECEEGLGPQGGACGLRGVHAPLLSPEGLDSEHVDHGRYFSLCQKVAMTVIKPV 594
>gi|239747616 PREDICTED: similar to hCG1996386 [Homo sapiens]
Length = 441
Score = 563 bits (1450), Expect = e-160
Identities = 299/443 (67%), Positives = 314/443 (70%), Gaps = 74/443 (16%)
Query: 238 MFVWRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQ 297
MFVWRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQ
Sbjct: 1 MFVWRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQ 60
Query: 298 --SLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNR 355
SLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNR
Sbjct: 61 AQSLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNR 120
Query: 356 TISQMLSEQWYTLGPNEMQKYDLAFQ----ECNKGSWEWSISEMGTATAPGVSSELLSVA 411
TISQMLSEQWYTLGPNEMQKYDLAFQ +G E + G A PG S +
Sbjct: 121 TISQMLSEQWYTLGPNEMQKYDLAFQVKVAHLQQGPKE--VQLRGQAHKPGASRSVTRAR 178
Query: 412 AQ-------------------TLQSSDTKEQL----LWGRTAAHSQETWLSLAQAFSHSG 448
LQ ++ ++ G H+ +A H+
Sbjct: 179 GSGAYQRWALPLPLGCPLNSCQLQPKHSRARIPRSSFCGAERLHTHMASEDIASDEEHTV 238
Query: 449 VHSLDG--REIDRQALQELTQVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSS 506
+H +G + AL LT + S + FGKVYGPTLSSS
Sbjct: 239 IHEEEGVMMSLLMMALAPLTLISS---------------------SRTFGKVYGPTLSSS 277
Query: 507 YTYSDASSSTLAPTSFLLGPGAFKAQESGQDSRAGPLRPLPLGMGAQGRLP--------- 557
YTYSDASSSTLAPTSFLLGPGAFKAQESGQDSRAGPLRPLPLGMGAQGRLP
Sbjct: 278 YTYSDASSSTLAPTSFLLGPGAFKAQESGQDSRAGPLRPLPLGMGAQGRLPRRSVSSQWI 337
Query: 558 -----------RGNPTDMDPTLEDPTTPRCKMRRCSSCSPKPNTPKCAMCDGDSFPFACT 606
RGNPTDMDPTLEDPTTPRCKMRRCSSCSPKPNTPKCAMCDGDSFPFACT
Sbjct: 338 LPPSGARDLKGRGNPTDMDPTLEDPTTPRCKMRRCSSCSPKPNTPKCAMCDGDSFPFACT 397
Query: 607 GGEAEDRLREPETEKALSSSLHA 629
GGEAEDRLREPETEKALSSSLHA
Sbjct: 398 GGEAEDRLREPETEKALSSSLHA 420
>gi|169162775 PREDICTED: similar to hCG1996386 [Homo sapiens]
Length = 441
Score = 563 bits (1450), Expect = e-160
Identities = 299/443 (67%), Positives = 314/443 (70%), Gaps = 74/443 (16%)
Query: 238 MFVWRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQ 297
MFVWRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQ
Sbjct: 1 MFVWRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQ 60
Query: 298 --SLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNR 355
SLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNR
Sbjct: 61 AQSLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNR 120
Query: 356 TISQMLSEQWYTLGPNEMQKYDLAFQ----ECNKGSWEWSISEMGTATAPGVSSELLSVA 411
TISQMLSEQWYTLGPNEMQKYDLAFQ +G E + G A PG S +
Sbjct: 121 TISQMLSEQWYTLGPNEMQKYDLAFQVKVAHLQQGPKE--VQLRGQAHKPGASRSVTRAR 178
Query: 412 AQ-------------------TLQSSDTKEQL----LWGRTAAHSQETWLSLAQAFSHSG 448
LQ ++ ++ G H+ +A H+
Sbjct: 179 GSGAYQRWALPLPLGCPLNSCQLQPKHSRARIPRSSFCGAERLHTHMASEDIASDEEHTV 238
Query: 449 VHSLDG--REIDRQALQELTQVVSGTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSS 506
+H +G + AL LT + S + FGKVYGPTLSSS
Sbjct: 239 IHEEEGVMMSLLMMALAPLTLISS---------------------SRTFGKVYGPTLSSS 277
Query: 507 YTYSDASSSTLAPTSFLLGPGAFKAQESGQDSRAGPLRPLPLGMGAQGRLP--------- 557
YTYSDASSSTLAPTSFLLGPGAFKAQESGQDSRAGPLRPLPLGMGAQGRLP
Sbjct: 278 YTYSDASSSTLAPTSFLLGPGAFKAQESGQDSRAGPLRPLPLGMGAQGRLPRRSVSSQWI 337
Query: 558 -----------RGNPTDMDPTLEDPTTPRCKMRRCSSCSPKPNTPKCAMCDGDSFPFACT 606
RGNPTDMDPTLEDPTTPRCKMRRCSSCSPKPNTPKCAMCDGDSFPFACT
Sbjct: 338 LPPSGARDLKGRGNPTDMDPTLEDPTTPRCKMRRCSSCSPKPNTPKCAMCDGDSFPFACT 397
Query: 607 GGEAEDRLREPETEKALSSSLHA 629
GGEAEDRLREPETEKALSSSLHA
Sbjct: 398 GGEAEDRLREPETEKALSSSLHA 420
>gi|239742769 PREDICTED: hypothetical protein XP_002342619 [Homo
sapiens]
Length = 351
Score = 421 bits (1083), Expect = e-117
Identities = 213/265 (80%), Positives = 222/265 (83%), Gaps = 18/265 (6%)
Query: 238 MFVWRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQ 297
MFVWRNVEGHS AVF WYSIPFLTPPCSH RPS LPVTQWPPTRENNLPSWQ LLMSVHQ
Sbjct: 1 MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ 60
Query: 298 --SLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNR 355
SLSALRKEQDSSSEKDGRSPNK DKDHI WPMSG+H+LQQAAPGPG AHQGHPNQDNR
Sbjct: 61 AQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR 120
Query: 356 TISQMLSEQWYTLGPNEMQKYDLAFQ----ECNKGSWEWSISEMGTATAPGVSSELLSVA 411
T+SQMLSE+WYTLGPNEMQKY+LAFQ +G E + G A PG S
Sbjct: 121 TVSQMLSERWYTLGPNEMQKYNLAFQVKVAHLQQGPKE--VQLRGQAHKPGASR------ 172
Query: 412 AQTLQSSDTKEQLLWGRTAAHSQETWLSLAQAFSHSGVHSLDGREIDRQALQELTQVVSG 471
SSDTKEQLLWGRTAAHSQ TWLSLAQAFSHSGVHSLDGREIDRQAL+ELTQVVSG
Sbjct: 173 ----SSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSG 228
Query: 472 TASYSGPKPSTQYGAPGHFAAPAFG 496
TASYSGPKPSTQ+GAPGHFAAP G
Sbjct: 229 TASYSGPKPSTQHGAPGHFAAPGEG 253
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 211 bits (538), Expect = 2e-54
Identities = 133/247 (53%), Positives = 150/247 (60%), Gaps = 46/247 (18%)
Query: 297 QSLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNRT 356
QSLSAL KE+DSSSEKDGRSPNK +KDHI PM+ + HQ HPNQDNRT
Sbjct: 172 QSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRA--LVHQRHPNQDNRT 229
Query: 357 ISQMLSEQWYTLGPNEMQKY-DLAFQE-------------CNKG---------------- 386
+S++L E WY LGP E QKY DLAFQ CNK
Sbjct: 230 VSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLA 289
Query: 387 -----SWEWSISEMGTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQETWL--- 438
+ E S+SE GTA APGVSSELLSVAAQTL SSDTK G ++ ++
Sbjct: 290 GGHKETRERSMSETGTAAAPGVSSELLSVAAQTLLSSDTKAP---GSSSCGAERLHTVGG 346
Query: 439 ---SLAQAFSHSGVHSLDGREIDRQALQELTQVVSGTASYSGPKPSTQYGAPGHFAAPAF 495
+ +AFSHSGVHSLDG E+D QALQELTQ+VSG ASYSGPKPSTQYGAPG FAAP
Sbjct: 347 PGSARPRAFSHSGVHSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFAAPGE 406
Query: 496 GKVYGPT 502
G T
Sbjct: 407 GGALAAT 413
Score = 104 bits (260), Expect = 3e-22
Identities = 75/196 (38%), Positives = 84/196 (42%), Gaps = 62/196 (31%)
Query: 555 RLPRGNPTDMDPTLEDPTTPRCKMRRCSSCSPKPNTPKCAMCDGDSFPFACTGGEAEDRL 614
R R N TD+D EDPT+P+ KMRR SSCS +PNTPK A C+GD F F TG EAED L
Sbjct: 1391 RKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFTFDRTGTEAEDVL 1450
Query: 615 REPETEKALSSSL------------------------HATAALQAHYAHIFPSKVC---- 646
E E +K SSL ATAA QA YA IFPSKVC
Sbjct: 1451 GELEYDKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADIFPSKVCLQLK 1510
Query: 647 ----------------------------------SAPALTPSPVGFLTGPHLAQTLDAAL 672
+APA TPSP G + A
Sbjct: 1511 IREVRQKIMQAATPTEQPPGAEAPLPVPPPTGTAAAPAPTPSPAGGPDPTSPSSDSGTAQ 1570
Query: 673 VAPPLPLPESHAGGRP 688
APPLP P G+P
Sbjct: 1571 AAPPLPPPPESGPGQP 1586
Score = 68.2 bits (165), Expect = 3e-11
Identities = 44/80 (55%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 473 ASYSGPKPSTQYGAPGHFAAP-AFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGPGAFKA 531
+S++ +P PG P AFGK YG SSS + S ASSS A TSF LG G FKA
Sbjct: 501 SSFTHCRPPLDPEPPGPPDPPVAFGKGYGSAPSSSAS-SPASSSASAATSFSLGSGTFKA 559
Query: 532 QESGQDSRAGPLRPLPLGMG 551
QESGQ S AGPLRP P G G
Sbjct: 560 QESGQGSTAGPLRPPPPGAG 579
Score = 58.2 bits (139), Expect = 3e-08
Identities = 35/68 (51%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 222 YSAPRP---AFSEASRGVSMFVWRNVEGHSVAVFPWYS-IPFLTP--PCSHMRPSKLPVT 275
YSA RP A S ASRG+ MFVW NVE SVAVFPW+S +PFL P P ++PS+
Sbjct: 2 YSAHRPLMPASSAASRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQP 61
Query: 276 QWPPTREN 283
P N
Sbjct: 62 ASHPVASN 69
>gi|169171742 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
Length = 679
Score = 163 bits (412), Expect = 7e-40
Identities = 91/143 (63%), Positives = 93/143 (65%), Gaps = 24/143 (16%)
Query: 669 DAALVAPPLPLPESHAGGRPQRRSQDSQYPL--------RTWTVCGGSNGGQDGYLLP-- 718
DAAL APPLPLPESH P +Q P R T+ G D LP
Sbjct: 522 DAALDAPPLPLPESHPCLTPPHPAQALVQPWLPCHCLCPRVGTLTAWLEG--DTPALPQH 579
Query: 719 ------------AVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGP 766
AVPGESWAVSLLRAPVHTM CGTFRAFHF ENSSCWGYKMECEEGLGP
Sbjct: 580 LGVSITTTGSPAAVPGESWAVSLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGP 639
Query: 767 QGGACGLGGVHAPLLSSEGLDSE 789
QGGACGLGGVHAPLLS EGLDSE
Sbjct: 640 QGGACGLGGVHAPLLSPEGLDSE 662
Score = 156 bits (394), Expect = 8e-38
Identities = 91/159 (57%), Positives = 102/159 (64%), Gaps = 14/159 (8%)
Query: 267 MRPSKLPVTQWPPTRENNLPSWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNKWDKDHIW 326
+ P K P PPT E + Q QSLSALRKEQDSSS+KDG SPNKWDKDHI
Sbjct: 298 VEPGKSP----PPTMEEEPWAPQGSPCWTAQSLSALRKEQDSSSKKDGHSPNKWDKDHIR 353
Query: 327 WPMSGSHNLQQAAPGPGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKY-DLAFQ---- 381
WPMSG H LQQAAPG GRAHQGHPNQDN T+SQ+LS++WYTLGPNE QKY D AFQ
Sbjct: 354 WPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDQAFQVKVA 413
Query: 382 ECNKGSWEWSISEMGTATAPGVSSELLSVAAQTLQSSDT 420
+G E + G A PG S +V + S DT
Sbjct: 414 HLQQGPKE--VQLRGQAHKPGASR---TVQGLHMASEDT 447
>gi|169172340 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
Length = 679
Score = 163 bits (412), Expect = 7e-40
Identities = 91/143 (63%), Positives = 93/143 (65%), Gaps = 24/143 (16%)
Query: 669 DAALVAPPLPLPESHAGGRPQRRSQDSQYPL--------RTWTVCGGSNGGQDGYLLP-- 718
DAAL APPLPLPESH P +Q P R T+ G D LP
Sbjct: 522 DAALDAPPLPLPESHPCLTPPHPAQALVQPWLPCHCLCPRVGTLTAWLEG--DTPALPQH 579
Query: 719 ------------AVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGP 766
AVPGESWAVSLLRAPVHTM CGTFRAFHF ENSSCWGYKMECEEGLGP
Sbjct: 580 LGVSITTTGSPAAVPGESWAVSLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGP 639
Query: 767 QGGACGLGGVHAPLLSSEGLDSE 789
QGGACGLGGVHAPLLS EGLDSE
Sbjct: 640 QGGACGLGGVHAPLLSPEGLDSE 662
Score = 158 bits (399), Expect = 2e-38
Identities = 93/165 (56%), Positives = 103/165 (62%), Gaps = 26/165 (15%)
Query: 267 MRPSKLPVTQWPPTRENN------LPSWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNKW 320
+ P K P PPT E P W QSLSALRKEQDSSS+KDG SPNKW
Sbjct: 298 VEPGKSP----PPTMEEEPWAPKGSPCWTA------QSLSALRKEQDSSSKKDGHSPNKW 347
Query: 321 DKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKY-DLA 379
DKDHI WPMSG H LQQAAPG GRAHQGHPNQDN T+SQ+LS++WYTLGPNE QKY DLA
Sbjct: 348 DKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLA 407
Query: 380 FQ----ECNKGSWEWSISEMGTATAPGVSSELLSVAAQTLQSSDT 420
FQ +G E + G A PG S +V + S DT
Sbjct: 408 FQVKVAHLQQGPKE--VQLRGQAHKPGASR---TVQGLHMASEDT 447
>gi|169170016 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
Length = 679
Score = 161 bits (408), Expect = 2e-39
Identities = 90/143 (62%), Positives = 92/143 (64%), Gaps = 24/143 (16%)
Query: 669 DAALVAPPLPLPESHAGGRPQRRSQDSQYPL--------RTWTVCGGSNGGQDGYLLP-- 718
DAAL APPLPLPESH P +Q P R T+ G D LP
Sbjct: 522 DAALDAPPLPLPESHPCLTPPHPAQALVQPWLPCHCLCPRVGTLTAWLEG--DTPALPQH 579
Query: 719 ------------AVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGP 766
AVPGESWAVSLLRAPVHTM CGTFRAFHF ENSSCWGYKMECEEGLGP
Sbjct: 580 LGVSITTTGSPAAVPGESWAVSLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGP 639
Query: 767 QGGACGLGGVHAPLLSSEGLDSE 789
QGGACGLGGVH PLLS EGLDSE
Sbjct: 640 QGGACGLGGVHVPLLSPEGLDSE 662
Score = 158 bits (399), Expect = 2e-38
Identities = 93/165 (56%), Positives = 103/165 (62%), Gaps = 26/165 (15%)
Query: 267 MRPSKLPVTQWPPTRENN------LPSWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNKW 320
+ P K P PPT E P W QSLSALRKEQDSSS+KDG SPNKW
Sbjct: 298 VEPGKSP----PPTMEEEPWAPKGSPCWTA------QSLSALRKEQDSSSKKDGHSPNKW 347
Query: 321 DKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKY-DLA 379
DKDHI WPMSG H LQQAAPG GRAHQGHPNQDN T+SQ+LS++WYTLGPNE QKY DLA
Sbjct: 348 DKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLA 407
Query: 380 FQ----ECNKGSWEWSISEMGTATAPGVSSELLSVAAQTLQSSDT 420
FQ +G E + G A PG S +V + S DT
Sbjct: 408 FQVKVAHLQQGPKE--VQLRGQAHKPGASR---TVQGLHMASEDT 447
>gi|239508816 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
Length = 679
Score = 161 bits (408), Expect = 2e-39
Identities = 90/143 (62%), Positives = 92/143 (64%), Gaps = 24/143 (16%)
Query: 669 DAALVAPPLPLPESHAGGRPQRRSQDSQYPL--------RTWTVCGGSNGGQDGYLLP-- 718
DAAL APPLPLPESH P +Q P R T+ G D LP
Sbjct: 522 DAALDAPPLPLPESHPCLTPPHPAQALVQPWLPCHCLCPRVGTLTAWLEG--DTPALPQH 579
Query: 719 ------------AVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGP 766
AVPGESWAVSLLRAPVHTM CGTFRAFHF ENSSCWGYKMECEEGLGP
Sbjct: 580 LGVSITTTGSPAAVPGESWAVSLLRAPVHTMKCGTFRAFHFLENSSCWGYKMECEEGLGP 639
Query: 767 QGGACGLGGVHAPLLSSEGLDSE 789
QGGACGLGGVH PLLS EGLDSE
Sbjct: 640 QGGACGLGGVHVPLLSPEGLDSE 662
Score = 158 bits (399), Expect = 2e-38
Identities = 93/165 (56%), Positives = 103/165 (62%), Gaps = 26/165 (15%)
Query: 267 MRPSKLPVTQWPPTRENN------LPSWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNKW 320
+ P K P PPT E P W QSLSALRKEQDSSS+KDG SPNKW
Sbjct: 298 VEPGKSP----PPTMEEEPWAPKGSPCWTA------QSLSALRKEQDSSSKKDGHSPNKW 347
Query: 321 DKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKY-DLA 379
DKDHI WPMSG H LQQAAPG GRAHQGHPNQDN T+SQ+LS++WYTLGPNE QKY DLA
Sbjct: 348 DKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDLA 407
Query: 380 FQ----ECNKGSWEWSISEMGTATAPGVSSELLSVAAQTLQSSDT 420
FQ +G E + G A PG S +V + S DT
Sbjct: 408 FQVKVAHLQQGPKE--VQLRGQAHKPGASR---TVQGLHMASEDT 447
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 37.7 bits (86), Expect = 0.043
Identities = 80/379 (21%), Positives = 129/379 (34%), Gaps = 48/379 (12%)
Query: 266 HMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNKWDKDHI 325
H P P T +P + S H S + SS + G +P+ H
Sbjct: 1165 HRSPGSTPTTHFPASSTT----------SGHSEKSTIFH---SSPDASGTTPSS---AHS 1208
Query: 326 WWPMSGSHNLQQAAPG-------PGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKYDL 378
G + +PG PG ++ + T TL P M +
Sbjct: 1209 TTSGRGESTTSRISPGSTEITTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPASMTSLGV 1268
Query: 379 AFQECNK----GSWEWSISEMGTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQ 434
+ GS ++S T T PG+S E +V + + S++T T+ H +
Sbjct: 1269 GEESTTSRSQPGSTHSTVSPASTTT-PGLSEESTTVYSSSRGSTETTVFPHSTTTSVHGE 1327
Query: 435 E-TWLSLAQAFSHSGVHSLDGREIDRQALQELTQVVSGTASYSGPKPSTQYGAPGHFAAP 493
E T A +H+ + + D + + + ++ G STQ G P
Sbjct: 1328 EPTTFHSRPASTHTTLFTEDSTT---------SGLTEESTAFPGSPASTQTGLPATLTTA 1378
Query: 494 AFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGPGA-FKAQESGQDSRAGPLRPLPLGMGA 552
G+ SSS + S + TS L+G + S ++ P P +
Sbjct: 1379 DLGEESTTFPSSSGSTGTKLSPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSE 1438
Query: 553 QGRLPRGNPTDMDPTLEDPTTPRCKMRRCSSCS-PKPNTPKCAMCDGDSFPFACTGGEAE 611
+ +P D TL TT + SS S +P + +FP + T
Sbjct: 1439 KSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTT-----AFPDSTT---TS 1490
Query: 612 DRLREPETEKALSSSLHAT 630
D +EP T + S AT
Sbjct: 1491 DLSQEPTTSHSSQGSTEAT 1509
Score = 32.3 bits (72), Expect = 1.8
Identities = 68/333 (20%), Positives = 111/333 (33%), Gaps = 39/333 (11%)
Query: 266 HMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNKWDKDHI 325
H P P T +P + S H S + SS + G +P+ H
Sbjct: 2248 HRSPGSTPTTHFPASSTT----------SGHSEKSTIFH---SSPDASGTTPSS---AHS 2291
Query: 326 WWPMSGSHNLQQAAPG-------PGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKYDL 378
G + +PG PG ++ + T TL P M +
Sbjct: 2292 TTSGRGESTTSRISPGSTEITTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPASMTSLGV 2351
Query: 379 AFQECNK----GSWEWSISEMGTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQ 434
+ GS ++S T T PG+S E +V + + S++T T+ +
Sbjct: 2352 GEESTTSRSQPGSTHSTVSPASTTT-PGLSEESTTVYSSSPGSTETTVFPRTPTTSVRGE 2410
Query: 435 E-TWLSLAQAFSHSGVHSLDGREIDRQALQELTQVVSGTASYSGPKPSTQYGAPGHFAAP 493
E T A +H+ + + D + + + ++ G STQ G P
Sbjct: 2411 EPTTFHSRPASTHTTLFTEDSTT---------SGLTEESTAFPGSPASTQTGLPATLTTA 2461
Query: 494 AFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGPGA-FKAQESGQDSRAGPLRPLPLGMGA 552
G+ SSS + S + TS L+G + S ++ P P +
Sbjct: 2462 DLGEESTTFPSSSGSTGTTLSPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSE 2521
Query: 553 QGRLPRGNPTDMDPTLEDPTTPRCKMRRCSSCS 585
+ +P D TL TT + SS S
Sbjct: 2522 KSTTFYTSPRSPDATLSPATTTSSGVSEESSTS 2554
Score = 32.0 bits (71), Expect = 2.4
Identities = 68/333 (20%), Positives = 111/333 (33%), Gaps = 39/333 (11%)
Query: 266 HMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNKWDKDHI 325
H P P T +P + S H S + SS + G +P+ H
Sbjct: 2722 HRSPGSTPTTHFPASSTT----------SGHSEKSTIFH---SSPDASGTTPSS---AHS 2765
Query: 326 WWPMSGSHNLQQAAPG-------PGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKYDL 378
G + +PG PG ++ + T TL P M +
Sbjct: 2766 TTSGRGESTTSRISPGSTEITTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPASMTSLGV 2825
Query: 379 AFQECNK----GSWEWSISEMGTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQ 434
+ GS ++S T T PG+S E +V + + S++T T+ +
Sbjct: 2826 GEESTTSRSQPGSTHSTVSPASTTT-PGLSEESTTVYSSSPGSTETTVFPRSTTTSVRGE 2884
Query: 435 E-TWLSLAQAFSHSGVHSLDGREIDRQALQELTQVVSGTASYSGPKPSTQYGAPGHFAAP 493
E T A +H+ + + D + + + ++ G STQ G P
Sbjct: 2885 EPTTFHSRPASTHTTLFTEDSTT---------SGLTEESTAFPGSPASTQTGLPATLTTA 2935
Query: 494 AFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGPGA-FKAQESGQDSRAGPLRPLPLGMGA 552
G+ SSS + S + TS L+G + S ++ P P +
Sbjct: 2936 DLGEESTTFPSSSGSTGTTLSPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSE 2995
Query: 553 QGRLPRGNPTDMDPTLEDPTTPRCKMRRCSSCS 585
+ +P D TL TT + SS S
Sbjct: 2996 KSTTFYTSPRSPDATLSPATTTSSGVSEESSTS 3028
Score = 31.6 bits (70), Expect = 3.1
Identities = 78/379 (20%), Positives = 127/379 (33%), Gaps = 48/379 (12%)
Query: 266 HMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNKWDKDHI 325
H P P T +P + S H S + SS + G +P+ H
Sbjct: 3805 HRSPGSTPTTHFPASSTT----------SGHSEKSTIFH---SSPDASGTTPSS---AHS 3848
Query: 326 WWPMSGSHNLQQAAPG-------PGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKYDL 378
G + +PG PG ++ + T TL P M +
Sbjct: 3849 TTSGRGESTTSRISPGSTEITTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPASMTSLGV 3908
Query: 379 AFQECNK----GSWEWSISEMGTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQ 434
+ GS ++S T T PG+S E +V + + S++T T+ +
Sbjct: 3909 GEESTTSRSQPGSTHSTVSPASTTT-PGLSEESTTVYSSSPGSTETTVFPRSTTTSVRRE 3967
Query: 435 E-TWLSLAQAFSHSGVHSLDGREIDRQALQELTQVVSGTASYSGPKPSTQYGAPGHFAAP 493
E T A +H+ + + D + + + ++ G STQ G P
Sbjct: 3968 EPTTFHSRPASTHTTLFTEDSTT---------SGLTEESTAFPGSPASTQTGLPATLTTA 4018
Query: 494 AFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGPGA-FKAQESGQDSRAGPLRPLPLGMGA 552
G+ SSS + S + TS L+G + S ++ P P +
Sbjct: 4019 DLGEESTTFPSSSGSTGTKLSPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSE 4078
Query: 553 QGRLPRGNPTDMDPTLEDPTTPRCKMRRCSSCS-PKPNTPKCAMCDGDSFPFACTGGEAE 611
+ +P D TL TT + SS S +P + +FP + T
Sbjct: 4079 KSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTT-----AFPDSTT---TS 4130
Query: 612 DRLREPETEKALSSSLHAT 630
+EP T + S AT
Sbjct: 4131 GLSQEPTTSHSSQGSTEAT 4149
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 37.7 bits (86), Expect = 0.043
Identities = 80/379 (21%), Positives = 129/379 (34%), Gaps = 48/379 (12%)
Query: 266 HMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNKWDKDHI 325
H P P T +P + S H S + SS + G +P+ H
Sbjct: 652 HRSPGSTPTTHFPASSTT----------SGHSEKSTIFH---SSPDASGTTPSS---AHS 695
Query: 326 WWPMSGSHNLQQAAPG-------PGRAHQGHPNQDNRTISQMLSEQWYTLGPNEMQKYDL 378
G + +PG PG ++ + T TL P M +
Sbjct: 696 TTSGRGESTTSRISPGSTEITTLPGSTTTPGLSEASTTFYSSPRSPTTTLSPASMTSLGV 755
Query: 379 AFQECNK----GSWEWSISEMGTATAPGVSSELLSVAAQTLQSSDTKEQLLWGRTAAHSQ 434
+ GS ++S T T PG+S E +V + + S++T T+ H +
Sbjct: 756 GEESTTSRSQPGSTHSTVSPASTTT-PGLSEESTTVYSSSRGSTETTVFPHSTTTSVHGE 814
Query: 435 E-TWLSLAQAFSHSGVHSLDGREIDRQALQELTQVVSGTASYSGPKPSTQYGAPGHFAAP 493
E T A +H+ + + D + + + ++ G STQ G P
Sbjct: 815 EPTTFHSRPASTHTTLFTEDSTT---------SGLTEESTAFPGSPASTQTGLPATLTTA 865
Query: 494 AFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGPGA-FKAQESGQDSRAGPLRPLPLGMGA 552
G+ SSS + S + TS L+G + S ++ P P +
Sbjct: 866 DLGEESTTFPSSSGSTGTKLSPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSE 925
Query: 553 QGRLPRGNPTDMDPTLEDPTTPRCKMRRCSSCS-PKPNTPKCAMCDGDSFPFACTGGEAE 611
+ +P D TL TT + SS S +P + +FP + T
Sbjct: 926 KSTTFYTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTT-----AFPDSTT---TS 977
Query: 612 DRLREPETEKALSSSLHAT 630
D +EP T + S AT
Sbjct: 978 DLSQEPTTSHSSQGSTEAT 996
>gi|217035121 HMG-BOX transcription factor BBX isoform 1 [Homo
sapiens]
Length = 941
Score = 36.6 bits (83), Expect = 0.096
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 297 QSLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNRT 356
Q L A EQD +D SP + + PM+ L Q HP DNR
Sbjct: 56 QLLGADGLEQDVGETEDDESPEQRARR----PMNAF--LLFCKRHRSLVRQEHPRLDNRG 109
Query: 357 ISQMLSEQWYTLGPNEMQKY-DL------AFQECNKGSWEW 390
+++L++ W L P E QKY D+ AF + N G ++W
Sbjct: 110 ATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPG-YKW 149
>gi|18378731 HMG-BOX transcription factor BBX isoform 2 [Homo
sapiens]
Length = 911
Score = 36.6 bits (83), Expect = 0.096
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 297 QSLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNRT 356
Q L A EQD +D SP + + PM+ L Q HP DNR
Sbjct: 56 QLLGADGLEQDVGETEDDESPEQRARR----PMNAF--LLFCKRHRSLVRQEHPRLDNRG 109
Query: 357 ISQMLSEQWYTLGPNEMQKY-DL------AFQECNKGSWEW 390
+++L++ W L P E QKY D+ AF + N G ++W
Sbjct: 110 ATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPG-YKW 149
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 35.4 bits (80), Expect = 0.21
Identities = 58/242 (23%), Positives = 86/242 (35%), Gaps = 58/242 (23%)
Query: 471 GTASYSGPKPSTQYGAPGHFAAPAFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGPGAFK 530
G + + +P+T G P + P++ +S ++ A+ PG
Sbjct: 554 GVGTSTSHQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPAT------------PGGGT 601
Query: 531 AQESGQDSRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPRCKMRRCSSCSPKPNT 590
AQ AG +P+P GMG T PTTP ++ +P+P T
Sbjct: 602 AQTP----EAGTSQPMPPGMGTS-------------TSHQPTTP----GGGTAQTPEPGT 640
Query: 591 PKCAMCDGDSFPFACTGGEAEDRLREPETEKALSSSLHATAALQ------AHYAHIFPS- 643
+ M S P + GG +ED+ AL L A L + H P
Sbjct: 641 SQ-PMPLSKSTP-SSGGGPSEDKRFSVVDMAALGGVLGALLLLALLGLAVLVHKHYGPRL 698
Query: 644 KVCSAPALTPSPVGF---------------LTGP-HLAQTLDAALVAPPLPLPESHAGGR 687
K CS A P P GF + P H + +A + A P P + GG
Sbjct: 699 KCCSGKAPEPQPQGFDNQAFLPDHKANWAPVPSPTHDPKPAEAPMPAEPAPPGPASPGGA 758
Query: 688 PQ 689
P+
Sbjct: 759 PE 760
>gi|239754458 PREDICTED: hypothetical protein [Homo sapiens]
Length = 180
Score = 35.0 bits (79), Expect = 0.28
Identities = 35/116 (30%), Positives = 43/116 (37%), Gaps = 16/116 (13%)
Query: 489 HFAAPAFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGPGAF-KAQESGQDSRAG------ 541
HF A G++ G TLS S + P PGA + + + RAG
Sbjct: 17 HFPPAARGRLPGETLSPSPRAAALPPLQQRPPG---APGALGRPKPVSRGPRAGLREWPQ 73
Query: 542 -PLRPLPLGMGAQGRLPRGN-PTDMDPTLEDPTTPRCKMR----RCSSCSPKPNTP 591
P RP PLG Q R P + P P PRC R S +P P P
Sbjct: 74 QPWRPGPLGAPLQDRAPSAHVPGSASRPTATPAPPRCSRRPPTTTVSRVAPSPGRP 129
>gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo
sapiens]
Length = 180
Score = 35.0 bits (79), Expect = 0.28
Identities = 35/116 (30%), Positives = 43/116 (37%), Gaps = 16/116 (13%)
Query: 489 HFAAPAFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGPGAF-KAQESGQDSRAG------ 541
HF A G++ G TLS S + P PGA + + + RAG
Sbjct: 17 HFPPAARGRLPGETLSPSPRAAALPPLQQRPPG---APGALGRPKPVSRGPRAGLREWPQ 73
Query: 542 -PLRPLPLGMGAQGRLPRGN-PTDMDPTLEDPTTPRCKMR----RCSSCSPKPNTP 591
P RP PLG Q R P + P P PRC R S +P P P
Sbjct: 74 QPWRPGPLGAPLQDRAPSAHVPGSASRPTATPAPPRCSRRPPTTTVSRVAPSPGRP 129
>gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo
sapiens]
Length = 180
Score = 35.0 bits (79), Expect = 0.28
Identities = 35/116 (30%), Positives = 43/116 (37%), Gaps = 16/116 (13%)
Query: 489 HFAAPAFGKVYGPTLSSSYTYSDASSSTLAPTSFLLGPGAF-KAQESGQDSRAG------ 541
HF A G++ G TLS S + P PGA + + + RAG
Sbjct: 17 HFPPAARGRLPGETLSPSPRAAALPPLQQRPPG---APGALGRPKPVSRGPRAGLREWPQ 73
Query: 542 -PLRPLPLGMGAQGRLPRGN-PTDMDPTLEDPTTPRCKMR----RCSSCSPKPNTP 591
P RP PLG Q R P + P P PRC R S +P P P
Sbjct: 74 QPWRPGPLGAPLQDRAPSAHVPGSASRPTATPAPPRCSRRPPTTTVSRVAPSPGRP 129
>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
Length = 567
Score = 35.0 bits (79), Expect = 0.28
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 172 AEAVPLLGKVVGDMSGASSLALGCPAAQPPWLRRGRGGVSPCQEPPARTKYSAPRPAFSE 231
A+A P G G +S A PA PP R G SP Q PA+ + PA +
Sbjct: 37 AQASPAQASPAGTPPGRASPAQASPAGTPPG-RASPGRASPAQASPAQASPARASPALAS 95
Query: 232 ASRGVS 237
SR S
Sbjct: 96 LSRSSS 101
>gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo
sapiens]
Length = 1726
Score = 34.7 bits (78), Expect = 0.36
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Query: 294 SVHQSLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQD 353
+V+ +LSA + S+ +K+G N WD P + G G H G
Sbjct: 272 TVNSALSAKQNGSSSAVQKEGSGGNAWDSGPPAGPGILAWGRGSGNNGVGNIHSGAWGHP 331
Query: 354 NRTISQMLSEQWYTLGPNEMQKYDLAFQECNKGSWEW---SISEMGTATAPG 402
+R+ S ++ +W PN+ D+ KGS W S++ PG
Sbjct: 332 SRSTSNGVNGEW-GKPPNQHSNSDIN----GKGSTGWESPSVTSQNPTVQPG 378
>gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo
sapiens]
Length = 1690
Score = 34.7 bits (78), Expect = 0.36
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Query: 294 SVHQSLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQD 353
+V+ +LSA + S+ +K+G N WD P + G G H G
Sbjct: 272 TVNSALSAKQNGSSSAVQKEGSGGNAWDSGPPAGPGILAWGRGSGNNGVGNIHSGAWGHP 331
Query: 354 NRTISQMLSEQWYTLGPNEMQKYDLAFQECNKGSWEW---SISEMGTATAPG 402
+R+ S ++ +W PN+ D+ KGS W S++ PG
Sbjct: 332 SRSTSNGVNGEW-GKPPNQHSNSDIN----GKGSTGWESPSVTSQNPTVQPG 378
>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
Length = 1334
Score = 34.7 bits (78), Expect = 0.36
Identities = 70/275 (25%), Positives = 100/275 (36%), Gaps = 39/275 (14%)
Query: 541 GPLRPLPLGMGAQGRLP---RGNPTDMDPTLEDPTTPRCKMRRC----SSCSPKPNTPKC 593
GPL P P +LP +P+ P L P PR C S SP P +
Sbjct: 446 GPLLPSPARGLKFLKLPPTSEKSPSPGGPQLS-PQLPRNSRIPCRNSGSDGSPSPLLARR 504
Query: 594 AMCDGD----------SFPFACTGGEAEDRLREPETEKALSSSLHATAALQAHYAHIFPS 643
+ G+ + P C +LR P++ ALS++L + Y +I
Sbjct: 505 GLGGGELSPEGAQGLPTSPSPCYTTPDSTQLRPPQS--ALSTTLSPGPVVSPCYENILDL 562
Query: 644 KVCS----APALTPSPVGFLTGPHLAQTLDAA---LVAPPLP----LPESHAGGRPQRRS 692
+ +P PSP+ T P L + A L +P +P LPES+ G PQ +S
Sbjct: 563 SRSTFRGPSPEPPPSPLQVPTYPQLTLEVPQAPEVLRSPGVPPSPCLPESYPYGSPQEKS 622
Query: 693 QD-----SQYPLRTWTVCGGSNGGQDGYLLPAVPGESWAVSLLRAPVHTMNCGTFRAFHF 747
D S +P R Q P PG + L A + + G A
Sbjct: 623 LDKAGSESPHPGRRTPGNSSKKPSQGSGRRPGDPGSTPLRDRL-AALGKLKTGPEGALGS 681
Query: 748 SENSSCWGYKMECEEGLGPQGGACG--LGGVHAPL 780
+N E G G G + G + +H PL
Sbjct: 682 EKNGVPARPGTEKTRGPGKSGESAGDMVPSIHRPL 716
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 33.9 bits (76), Expect = 0.62
Identities = 50/193 (25%), Positives = 67/193 (34%), Gaps = 26/193 (13%)
Query: 173 EAVPLLGKVVGDMSGASSLALGCPAAQPPWLRRGRGGVSPCQEPPARTKY--SAPRPAFS 230
E+ PLLG G G G PAA P PC+ P Y P P+ S
Sbjct: 1067 ESQPLLGPGAGGAGGTGGAGGGAPAAPP-----------PCRAAPPPCPYLDLEPSPSDS 1115
Query: 231 EASRGVSMFVWRNVEGHSVAVFPW-YSIPFLTPPCSHMRPSKLPVTQWPPTRENNLP--- 286
E S + +E A FP+ Y+ PP + KL W + LP
Sbjct: 1116 EDSESLGGASLGGLEPWWFADFPYPYAERLGPPPGRYWSVDKL--GGWRAGSWDYLPPRS 1173
Query: 287 ---SWQLLLMSVHQSLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPG 343
+W + SL L + S DG W W +G ++A G
Sbjct: 1174 GPAAWHCRHCA---SLELLPPPRHLSCSHDGLDGGWWAPPPPPW-AAGPLPRRRARCGCP 1229
Query: 344 RAHQGHPNQDNRT 356
R+H P +RT
Sbjct: 1230 RSHPHRPRASHRT 1242
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 33.9 bits (76), Expect = 0.62
Identities = 46/174 (26%), Positives = 66/174 (37%), Gaps = 22/174 (12%)
Query: 530 KAQESGQDSRAGPLRPLPLGMGAQGRLPRGNPTDMDPTLEDPTTPRCKMRRCSSCSPKPN 589
+A+ G+ RAG +P+ RL +P+ + P++P +PKP+
Sbjct: 2135 EAEPRGRHRRAGAPLEIPVARLGARRLQE-SPSLSALSEAQPSSP------ARPSAPKPS 2187
Query: 590 TPKCA---MCDGDSFPFACTGGEAEDRLREPETEKALSS-------SLHATAALQAHYAH 639
TPK A P A+D+ EP E +S +L A YA
Sbjct: 2188 TPKSAEPSATTPSDAPQPPAPQPAQDKAPEPRPEPVRASKPAPPPQALQTLALPLTPYAQ 2247
Query: 640 IFPSKVCSAPALTPS--PVGFLTGPHLAQTLDAALVAPPLPLPESH---AGGRP 688
I S S A PS P + P + A + +PP PE AGG P
Sbjct: 2248 IIQSLQLSGHAQGPSQGPAAPPSEPKPHAAVFARVASPPPGAPEKRVPSAGGPP 2301
>gi|4507831 Unc-51-like kinase 1 [Homo sapiens]
Length = 1050
Score = 33.5 bits (75), Expect = 0.81
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 592 KCAMCDGDSF---PFACTG---GEAEDRLREPETEKALSSSLHATAALQAHYAHIFPSKV 645
K + CD D F P G EA P++ SSL A+A L++H PS
Sbjct: 348 KDSSCDTDDFVMVPAQFPGDLVAEAPSAKPPPDSLMCSGSSLVASAGLESHGRTPSPSPP 407
Query: 646 CSAPALTPSPVGFLTGPHLAQTLDAALVAPPLPLP 680
CS+ +PSP G GP + A++ P+P+P
Sbjct: 408 CSS---SPSPSG-RAGPFSSSRCGASV---PIPVP 435
>gi|169184624 PREDICTED: similar to synaptotagmin XV-b [Homo
sapiens]
Length = 267
Score = 33.1 bits (74), Expect = 1.1
Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 8/100 (8%)
Query: 500 GPTLSSSYTYSDASSSTLAPTSFLLGPGAFKAQESGQDSRAGPLRPLPLGMGAQGRLPR- 558
GP L+ + + A AP LG G +A + AG L PLP RLP
Sbjct: 98 GPALAGALRFPGAHGRLCAPPPPGLGLGQGRAGAGLRPRGAGSL-PLP----CTARLPAP 152
Query: 559 --GNPTDMDPTLEDPTTPRCKMRRCSSCSPKPNTPKCAMC 596
G + D PT PR +R + P+P P C
Sbjct: 153 QLGTSSTTDRPCARPTAPRGALRDGLAAQPQPPRPARPAC 192
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,997,015
Number of Sequences: 37866
Number of extensions: 2160584
Number of successful extensions: 6709
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 6573
Number of HSP's gapped (non-prelim): 223
length of query: 811
length of database: 18,247,518
effective HSP length: 111
effective length of query: 700
effective length of database: 14,044,392
effective search space: 9831074400
effective search space used: 9831074400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.