LOC100130600 7889

Name: LOC100130600	Sequence: fasta or formatted (594aa)		NCBI GI: 169171432
Description: PREDICTED: similar to hCG2014367		Referenced in: SOX Family
Other entries for this name: alt prot [594aa] PREDICTED: hypothetical protein LOC100130600 alt prot [594aa] PREDICTED: similar to hCG2014367 alt prot [594aa] PREDICTED: similar to hCG2014367
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 55 2 C cysteine 2.9 17 1 D aspartate 3.7 22 1 E glutamate 4.4 26 2 F phenylalanine 2.5 15 1 G glycine 8.8 52 2 H histidine 3.5 21 1 I isoleucine 0.8 5 1 K lysine 3.5 21 1 L leucine 9.3 55 3 M methionine 2.4 14 1 N asparagine 2.4 14 1 P proline 9.1 54 2 Q glutamine 5.4 32 2 R arginine 4.9 29 2 S serine 12.1 72 3 T threonine 5.9 35 2 V valine 4.7 28 2 W tryptophan 2.0 12 1 Y tyrosine 2.5 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG2014367 LOC100130600 0.998 PREDICTED: hypothetical protein LOC100130600 LOC100130600 0.998 PREDICTED: similar to hCG2014367 LOC100130600 0.996 PREDICTED: similar to hCG2014367 LOC648262 0.906 PREDICTED: hypothetical protein LOC100288667 0.898 PREDICTED: hypothetical protein XP_002344293 LOC648262 0.393 PREDICTED: similar to hCG1996386 LOC648262 0.393 PREDICTED: similar to hCG1996386 LOC100289067 0.310 PREDICTED: hypothetical protein XP_002342619 CIC 0.162 capicua homolog LOC442676 0.124 PREDICTED: hypothetical protein LOC442676 LOC442676 0.124 PREDICTED: hypothetical protein LOC442676 LOC442676 0.124 PREDICTED: hypothetical protein LOC442676 LOC442676 0.122 PREDICTED: hypothetical protein LOC442676 KIAA1602 0.012 hypothetical protein LOC57701 BBX 0.012 HMG-BOX transcription factor BBX isoform 1 BBX 0.012 HMG-BOX transcription factor BBX isoform 2 NACA 0.012 nascent polypeptide-associated complex alpha subuni... FAM83H 0.010 FAM83H ZC3H4 0.009 zinc finger CCCH-type containing 4 ERF 0.008 Ets2 repressor factor MUC5AC 0.008 mucin 5AC MUC5B 0.008 mucin 5, subtype B, tracheobronchial TCF7L2 0.007 transcription factor 7-like 2 isoform 1 TCF7L2 0.007 transcription factor 7-like 2 isoform 2 TCF7L2 0.007 transcription factor 7-like 2 isoform 6 TCF7L2 0.007 transcription factor 7-like 2 isoform 5 TCF7L2 0.007 transcription factor 7-like 2 isoform 4 TCF7L2 0.007 transcription factor 7-like 2 isoform 3 BMP6 0.007 bone morphogenetic protein 6 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.