LOC442676 16320

Name: LOC442676	Sequence: fasta or formatted (679aa)		NCBI GI: 239508816
Description: PREDICTED: hypothetical protein LOC442676		Referenced in: SOX Family
Other entries for this name: alt mRNA [679aa] PREDICTED: hypothetical protein LOC442676 alt prot [679aa] PREDICTED: hypothetical protein LOC442676 alt prot [679aa] PREDICTED: hypothetical protein LOC442676
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 56 2 C cysteine 4.1 28 1 D aspartate 3.1 21 1 E glutamate 5.3 36 3 F phenylalanine 1.6 11 2 G glycine 9.4 64 2 H histidine 5.0 34 1 I isoleucine 1.8 12 1 K lysine 4.9 33 2 L leucine 9.0 61 2 M methionine 2.4 16 2 N asparagine 2.9 20 1 P proline 10.5 71 3 Q glutamine 4.9 33 2 R arginine 4.4 30 4 S serine 8.4 57 3 T threonine 5.2 35 3 V valine 5.6 38 2 W tryptophan 2.8 19 1 Y tyrosine 0.6 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC442676 LOC442676 1.000 PREDICTED: hypothetical protein LOC442676 LOC442676 0.999 PREDICTED: hypothetical protein LOC442676 LOC442676 0.997 PREDICTED: hypothetical protein LOC442676 LOC648262 0.164 PREDICTED: similar to hCG1996386 LOC648262 0.164 PREDICTED: similar to hCG1996386 CIC 0.157 capicua homolog LOC100289067 0.132 PREDICTED: hypothetical protein XP_002342619 LOC100130600 0.105 PREDICTED: similar to hCG2014367 LOC100130600 0.105 PREDICTED: similar to hCG2014367 LOC100130600 0.105 PREDICTED: hypothetical protein LOC100130600 LOC100130600 0.105 PREDICTED: similar to hCG2014367 LOC648262 0.095 PREDICTED: hypothetical protein LOC100288667 0.094 PREDICTED: hypothetical protein XP_002344293 LEF1 0.018 lymphoid enhancer-binding factor 1 isoform 3 LEF1 0.018 lymphoid enhancer-binding factor 1 isoform 2 TNFRSF18 0.016 tumor necrosis factor receptor superfamily, member 1... SOX17 0.015 SRY-box 17 TCF7L2 0.015 transcription factor 7-like 2 isoform 2 LEF1 0.015 lymphoid enhancer-binding factor 1 isoform 1 ATN1 0.015 atrophin-1 ATN1 0.015 atrophin-1 TCF7L2 0.014 transcription factor 7-like 2 isoform 1 BBX 0.013 HMG-BOX transcription factor BBX isoform 1 BBX 0.013 HMG-BOX transcription factor BBX isoform 2 SMARCA4 0.013 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.013 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.013 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.013 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.013 SWI/SNF-related matrix-associated actin-dependent r... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.