LOC100288667 16676

Name: LOC100288667	Sequence: fasta or formatted (616aa)		NCBI GI: 239740980
Description: PREDICTED: hypothetical protein XP_002344293		Referenced in: SOX Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 57 2 C cysteine 2.8 17 1 D aspartate 3.4 21 1 E glutamate 5.0 31 2 F phenylalanine 2.6 16 1 G glycine 9.3 57 2 H histidine 3.6 22 1 I isoleucine 1.0 6 1 K lysine 3.1 19 1 L leucine 8.9 55 3 M methionine 2.1 13 1 N asparagine 2.4 15 2 P proline 9.6 59 2 Q glutamine 5.5 34 2 R arginine 5.5 34 2 S serine 11.5 71 3 T threonine 6.0 37 1 V valine 4.2 26 2 W tryptophan 2.3 14 1 Y tyrosine 1.9 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002344293 LOC648262 0.921 PREDICTED: hypothetical protein LOC100130600 0.865 PREDICTED: similar to hCG2014367 LOC100130600 0.863 PREDICTED: hypothetical protein LOC100130600 LOC100130600 0.863 PREDICTED: similar to hCG2014367 LOC100130600 0.861 PREDICTED: similar to hCG2014367 LOC648262 0.383 PREDICTED: similar to hCG1996386 LOC648262 0.383 PREDICTED: similar to hCG1996386 LOC100289067 0.346 PREDICTED: hypothetical protein XP_002342619 CIC 0.157 capicua homolog LOC442676 0.108 PREDICTED: hypothetical protein LOC442676 LOC442676 0.108 PREDICTED: hypothetical protein LOC442676 LOC442676 0.106 PREDICTED: hypothetical protein LOC442676 LOC442676 0.106 PREDICTED: hypothetical protein LOC442676 C16orf48 0.010 hypothetical protein LOC84080 BBX 0.010 HMG-BOX transcription factor BBX isoform 1 BBX 0.010 HMG-BOX transcription factor BBX isoform 2 NUP214 0.009 nucleoporin 214kDa RBMXL1 0.008 RNA binding motif protein, X-linked-like 1 RBMXL1 0.008 RNA binding motif protein, X-linked-like 1 C10orf47 0.008 hypothetical protein LOC254427 HEY2 0.007 hairy/enhancer-of-split related with YRPW motif 2 [Ho... MUC17 0.007 mucin 17 NACA 0.006 nascent polypeptide-associated complex alpha subuni... TNS1 0.006 tensin ANO8 0.006 anoctamin 8 SH2B3 0.006 SH2B adaptor protein 3 BTBD12 0.006 BTB (POZ) domain containing 12 KIAA1602 0.006 hypothetical protein LOC57701 HBP1 0.006 HMG-box transcription factor 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.