LOC100289406 17467

Name: LOC100289406	Sequence: fasta or formatted (180aa)		NCBI GI: 239743028
Description: PREDICTED: hypothetical protein XP_002342721		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.1 20 3 C cysteine 1.7 3 1 D aspartate 1.7 3 1 E glutamate 3.3 6 1 F phenylalanine 1.1 2 1 G glycine 9.4 17 1 H histidine 1.7 3 1 I isoleucine 0.0 0 0 K lysine 0.6 1 1 L leucine 5.6 10 1 M methionine 0.6 1 1 N asparagine 0.6 1 1 P proline 23.9 43 3 Q glutamine 4.4 8 2 R arginine 15.0 27 2 S serine 7.8 14 1 T threonine 6.1 11 3 V valine 4.4 8 2 W tryptophan 1.1 2 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342721 LOC100292589 1.000 PREDICTED: hypothetical protein LOC100290121 1.000 PREDICTED: hypothetical protein XP_002346879 FLJ22184 0.094 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.094 PREDICTED: hypothetical protein LOC80164 SAMD1 0.094 sterile alpha motif domain containing 1 SYN1 0.094 synapsin I isoform Ia SYN1 0.094 synapsin I isoform Ib FLJ22184 0.089 PREDICTED: hypothetical protein FLJ22184 SF3B4 0.089 splicing factor 3b, subunit 4 NACA 0.086 nascent polypeptide-associated complex alpha subuni... CPSF6 0.083 cleavage and polyadenylation specific factor 6, 68 ... ESX1 0.083 extraembryonic, spermatogenesis, homeobox 1-like [Ho... LOC100130360 0.081 PREDICTED: hypothetical protein IER5L 0.078 immediate early response 5-like SF1 0.075 splicing factor 1 isoform 2 SF1 0.075 splicing factor 1 isoform 1 HCN4 0.075 hyperpolarization activated cyclic nucleotide-gated p... PRB2 0.075 proline-rich protein BstNI subfamily 2 ZFPM1 0.075 zinc finger protein, multitype 1 PRB4 0.075 proline-rich protein BstNI subfamily 4 precursor [Ho... LOC100129036 0.075 PREDICTED: hypothetical protein LOC100129036 0.075 PREDICTED: hypothetical protein LOC100129036 0.075 PREDICTED: hypothetical protein WASF2 0.075 WAS protein family, member 2 COL4A4 0.075 alpha 4 type IV collagen precursor SF3A2 0.075 splicing factor 3a, subunit 2 PCLO 0.072 piccolo isoform 2 PCLO 0.072 piccolo isoform 1 WIPF2 0.072 WIRE protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.