Search of human proteins with 239753034

Search of human proteins with 239753034

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239753034 PREDICTED: hypothetical protein [Homo sapiens]
         (429 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753034 PREDICTED: hypothetical protein [Homo sapiens]           866   0.0  
gi|239747584 PREDICTED: hypothetical protein [Homo sapiens]           866   0.0  
gi|239741451 PREDICTED: hypothetical protein [Homo sapiens]           277   2e-74
gi|224465238 hypothetical protein LOC283999 [Homo sapiens]             40   0.005
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi...    39   0.009
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]        37   0.034
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]        37   0.034
gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]            37   0.045
gi|223941923 OTU domain containing 1 [Homo sapiens]                    36   0.059
gi|239755585 PREDICTED: hypothetical protein [Homo sapiens]            35   0.10 
gi|78042577 MAP7 domain containing 1 [Homo sapiens]                    35   0.10 
gi|20270245 GLI-Kruppel family member GLI4 [Homo sapiens]              35   0.13 
gi|29029597 glutamate receptor KA2 precursor [Homo sapiens]            35   0.13 
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       35   0.13 
gi|19924097 synapsin I isoform Ib [Homo sapiens]                       35   0.13 
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]            35   0.17 
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s...    35   0.17 
gi|155029552 hypothetical protein LOC388115 [Homo sapiens]             35   0.17 
gi|58331144 proline rich region 18 [Homo sapiens]                      34   0.22 
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    34   0.22 
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom...    34   0.29 
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom...    34   0.29 
gi|5901944 elastin microfibril interfacer 1 [Homo sapiens]             34   0.29 
gi|150417999 ubiquitin-conjugating enzyme E2Z [Homo sapiens]           34   0.29 
gi|194272183 G protein-coupled receptor 124 [Homo sapiens]             34   0.29 
gi|7706501 WW domain binding protein 11 [Homo sapiens]                 34   0.29 
gi|45439357 elongin A2 [Homo sapiens]                                  33   0.38 
gi|239754301 PREDICTED: hypothetical protein XP_002345934 [Homo ...    33   0.50 
gi|169167740 PREDICTED: hypothetical protein [Homo sapiens]            33   0.50 
gi|239748840 PREDICTED: hypothetical protein XP_002346835 [Homo ...    33   0.50 

>gi|239753034 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 429

 Score =  866 bits (2238), Expect = 0.0
 Identities = 429/429 (100%), Positives = 429/429 (100%)

Query: 1   MNFLSSPWMTSLTVVVLLMCSCLMASRGRSLELNLDSVADHPRASSSGHLPLAGDGNVCR 60
           MNFLSSPWMTSLTVVVLLMCSCLMASRGRSLELNLDSVADHPRASSSGHLPLAGDGNVCR
Sbjct: 1   MNFLSSPWMTSLTVVVLLMCSCLMASRGRSLELNLDSVADHPRASSSGHLPLAGDGNVCR 60

Query: 61  QGADTHLSGLDLKYPAQCPNRIQRLNHEEEETKDLQDRSQFPTQGAPKARRYTGVGYLPC 120
           QGADTHLSGLDLKYPAQCPNRIQRLNHEEEETKDLQDRSQFPTQGAPKARRYTGVGYLPC
Sbjct: 61  QGADTHLSGLDLKYPAQCPNRIQRLNHEEEETKDLQDRSQFPTQGAPKARRYTGVGYLPC 120

Query: 121 PSLESSVLKASLVLRNTVPDLNIQSRCFPCLLCAFLKKVVLAVKKQSSSSSSRLQYPLLM 180
           PSLESSVLKASLVLRNTVPDLNIQSRCFPCLLCAFLKKVVLAVKKQSSSSSSRLQYPLLM
Sbjct: 121 PSLESSVLKASLVLRNTVPDLNIQSRCFPCLLCAFLKKVVLAVKKQSSSSSSRLQYPLLM 180

Query: 181 LLSTVIYPGVPGRGRQRIKGAGLGMRRREVGTPPRAPLGADKRRETVSTRGWASWGLLFS 240
           LLSTVIYPGVPGRGRQRIKGAGLGMRRREVGTPPRAPLGADKRRETVSTRGWASWGLLFS
Sbjct: 181 LLSTVIYPGVPGRGRQRIKGAGLGMRRREVGTPPRAPLGADKRRETVSTRGWASWGLLFS 240

Query: 241 PCVPLLSLGGRKAAGTCKAEMLAGRLIYPGTLEAICSFEKACDGYSGDRGAALQLDQAAA 300
           PCVPLLSLGGRKAAGTCKAEMLAGRLIYPGTLEAICSFEKACDGYSGDRGAALQLDQAAA
Sbjct: 241 PCVPLLSLGGRKAAGTCKAEMLAGRLIYPGTLEAICSFEKACDGYSGDRGAALQLDQAAA 300

Query: 301 FWVTGEFTVWSAAQRLPQHLSSAQVTPAGAARQHQLGEAVPLASLRRDSGILRLLEDAPH 360
           FWVTGEFTVWSAAQRLPQHLSSAQVTPAGAARQHQLGEAVPLASLRRDSGILRLLEDAPH
Sbjct: 301 FWVTGEFTVWSAAQRLPQHLSSAQVTPAGAARQHQLGEAVPLASLRRDSGILRLLEDAPH 360

Query: 361 VAGSGRSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSPPGAAPLARPGRSGEGRRDTEA 420
           VAGSGRSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSPPGAAPLARPGRSGEGRRDTEA
Sbjct: 361 VAGSGRSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSPPGAAPLARPGRSGEGRRDTEA 420

Query: 421 RGPVGGRRR 429
           RGPVGGRRR
Sbjct: 421 RGPVGGRRR 429


>gi|239747584 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 429

 Score =  866 bits (2238), Expect = 0.0
 Identities = 429/429 (100%), Positives = 429/429 (100%)

Query: 1   MNFLSSPWMTSLTVVVLLMCSCLMASRGRSLELNLDSVADHPRASSSGHLPLAGDGNVCR 60
           MNFLSSPWMTSLTVVVLLMCSCLMASRGRSLELNLDSVADHPRASSSGHLPLAGDGNVCR
Sbjct: 1   MNFLSSPWMTSLTVVVLLMCSCLMASRGRSLELNLDSVADHPRASSSGHLPLAGDGNVCR 60

Query: 61  QGADTHLSGLDLKYPAQCPNRIQRLNHEEEETKDLQDRSQFPTQGAPKARRYTGVGYLPC 120
           QGADTHLSGLDLKYPAQCPNRIQRLNHEEEETKDLQDRSQFPTQGAPKARRYTGVGYLPC
Sbjct: 61  QGADTHLSGLDLKYPAQCPNRIQRLNHEEEETKDLQDRSQFPTQGAPKARRYTGVGYLPC 120

Query: 121 PSLESSVLKASLVLRNTVPDLNIQSRCFPCLLCAFLKKVVLAVKKQSSSSSSRLQYPLLM 180
           PSLESSVLKASLVLRNTVPDLNIQSRCFPCLLCAFLKKVVLAVKKQSSSSSSRLQYPLLM
Sbjct: 121 PSLESSVLKASLVLRNTVPDLNIQSRCFPCLLCAFLKKVVLAVKKQSSSSSSRLQYPLLM 180

Query: 181 LLSTVIYPGVPGRGRQRIKGAGLGMRRREVGTPPRAPLGADKRRETVSTRGWASWGLLFS 240
           LLSTVIYPGVPGRGRQRIKGAGLGMRRREVGTPPRAPLGADKRRETVSTRGWASWGLLFS
Sbjct: 181 LLSTVIYPGVPGRGRQRIKGAGLGMRRREVGTPPRAPLGADKRRETVSTRGWASWGLLFS 240

Query: 241 PCVPLLSLGGRKAAGTCKAEMLAGRLIYPGTLEAICSFEKACDGYSGDRGAALQLDQAAA 300
           PCVPLLSLGGRKAAGTCKAEMLAGRLIYPGTLEAICSFEKACDGYSGDRGAALQLDQAAA
Sbjct: 241 PCVPLLSLGGRKAAGTCKAEMLAGRLIYPGTLEAICSFEKACDGYSGDRGAALQLDQAAA 300

Query: 301 FWVTGEFTVWSAAQRLPQHLSSAQVTPAGAARQHQLGEAVPLASLRRDSGILRLLEDAPH 360
           FWVTGEFTVWSAAQRLPQHLSSAQVTPAGAARQHQLGEAVPLASLRRDSGILRLLEDAPH
Sbjct: 301 FWVTGEFTVWSAAQRLPQHLSSAQVTPAGAARQHQLGEAVPLASLRRDSGILRLLEDAPH 360

Query: 361 VAGSGRSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSPPGAAPLARPGRSGEGRRDTEA 420
           VAGSGRSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSPPGAAPLARPGRSGEGRRDTEA
Sbjct: 361 VAGSGRSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSPPGAAPLARPGRSGEGRRDTEA 420

Query: 421 RGPVGGRRR 429
           RGPVGGRRR
Sbjct: 421 RGPVGGRRR 429


>gi|239741451 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 175

 Score =  277 bits (708), Expect = 2e-74
 Identities = 136/137 (99%), Positives = 137/137 (100%)

Query: 293 LQLDQAAAFWVTGEFTVWSAAQRLPQHLSSAQVTPAGAARQHQLGEAVPLASLRRDSGIL 352
           +QLDQAAAFWVTGEFTVWSAAQRLPQHLSSAQVTPAGAARQHQLGEAVPLASLRRDSGIL
Sbjct: 39  VQLDQAAAFWVTGEFTVWSAAQRLPQHLSSAQVTPAGAARQHQLGEAVPLASLRRDSGIL 98

Query: 353 RLLEDAPHVAGSGRSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSPPGAAPLARPGRSG 412
           RLLEDAPHVAGSGRSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSPPGAAPLARPGRSG
Sbjct: 99  RLLEDAPHVAGSGRSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSPPGAAPLARPGRSG 158

Query: 413 EGRRDTEARGPVGGRRR 429
           EGRRDTEARGPVGGRRR
Sbjct: 159 EGRRDTEARGPVGGRRR 175


>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
          Length = 394

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 41/128 (32%), Positives = 51/128 (39%), Gaps = 21/128 (16%)

Query: 310 WSAAQRLPQHLSSAQVTPAGAARQHQLG----EAVPLASLRRDSGILRLLEDAPHVAGSG 365
           WS + R    LS++   P G A++ Q G     A P     + +G      D    AG  
Sbjct: 93  WSPSPRFAARLSTSSPFPQGRAQRPQRGGVDLPATPGGPRGQCAG---RSGDVLRRAGRR 149

Query: 366 RSRPPPQSLLQT--RPERASGSGGPGRGLQVPPGSPPGAAPLARPGRSGEGRR---DTEA 420
           R+RPPP   L     P R        RG   P  SPP   P    GR+  GRR     + 
Sbjct: 150 RARPPPVPRLPAPRAPRRP-------RGPATPDPSPPAGRPHGPAGRAAPGRRPGCTAQL 202

Query: 421 RGPVGGRR 428
           R P  GRR
Sbjct: 203 RAP--GRR 208


>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 673

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 51/204 (25%), Positives = 75/204 (36%), Gaps = 17/204 (8%)

Query: 212 TPPRA-PLGADKRRETVSTRGWASWGLLFSPCVPLLSLGGRKAAGTCKAEMLAGR----- 265
           TPPRA P G   R         AS   + S      +L      GT       G      
Sbjct: 178 TPPRASPTGMPSRTSPTGMPSTASLTKMDSTASITRTLSRASPTGTPPRASPTGSPPRAS 237

Query: 266 -LIYPGTLEAICSFEKACDGYSGDRGAALQLDQAAAFWVTGEFTVWSAAQRLPQHLSSAQ 324
             + P T   I +  +A       R +  ++D  A+   T      ++    P   +S  
Sbjct: 238 LSMMPSTALLIRTPPRASPTGMLSRTSLTKMDSTASITRTPSRPSTASPTGTPSR-ASLS 296

Query: 325 VTPAGAARQHQLGEAVPLASLRRDSGILRLLEDAPHVAGSGRSRPPPQSLLQTRPERASG 384
           +TP+ A+    L  A P   L R S  L  ++    +     SR PP++ +   P RAS 
Sbjct: 297 MTPSTASLMRMLPRASPTGMLSRTS--LTKMDSTASI-----SRTPPRASITRTPSRASP 349

Query: 385 SGGPGRGLQVPPGSPPGAAPLARP 408
           +G P      P G+P  A+P   P
Sbjct: 350 TGKPSTA--SPTGTPSRASPTGSP 371



 Score = 33.9 bits (76), Expect = 0.29
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 367 SRPPPQSLLQTRPERASGSGGPGRGLQVPPGSPPGAAPLARPGRS 411
           +R PP++     P RAS +G P R    P G+PP A+P   P R+
Sbjct: 619 TRTPPRASPTETPPRASPTGTPPRA--SPTGTPPRASPTGTPPRA 661



 Score = 32.3 bits (72), Expect = 0.85
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 370 PPQSLLQTRPERASGSGGPGRGLQVPPGSPPGAAPLARPGRS 411
           PP++     P RAS +G P R    P G+PP A+P   P R+
Sbjct: 631 PPRASPTGTPPRASPTGTPPRAS--PTGTPPRASPTGTPSRA 670



 Score = 30.0 bits (66), Expect = 4.2
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 10/92 (10%)

Query: 324 QVTPAGAARQHQLGEAVPLASLRRDSGILRLLEDAPHVAGSGRSRPPPQSLLQTRPERAS 383
           + +P G      L    P AS    +G+L         + +  +R PP++     P RAS
Sbjct: 391 RASPTGTPSTASLTRKPPRAS---PTGMLSRTSITKMDSTASPTRTPPRASPTGTPPRAS 447

Query: 384 GSGGPGR----GLQ---VPPGSPPGAAPLARP 408
            +G P R    G Q    P GSP  A+P   P
Sbjct: 448 PTGTPSRASPTGTQSTASPTGSPSTASPTGSP 479


>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
          Length = 744

 Score = 37.0 bits (84), Expect = 0.034
 Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 316 LPQHLSSAQVTPA-GAARQHQLGEAVPLASLRRDSGILRLLEDAPHVAGSGRSRPPPQSL 374
           LPQ++   Q  P  G     + G+ +PLASLR + G        P      R  P P  L
Sbjct: 86  LPQYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQG--------PRGEPGPRGPPGPPGL 137

Query: 375 ----LQTRPERASGSGGPGRGLQVPPGSPPGAAPLARPGRSGEGRRDTEARGPVG 425
               +     +    G PG G    PG P     +  PG  GE  +  E  GP+G
Sbjct: 138 PGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEI-GPMG 191


>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
          Length = 744

 Score = 37.0 bits (84), Expect = 0.034
 Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 316 LPQHLSSAQVTPA-GAARQHQLGEAVPLASLRRDSGILRLLEDAPHVAGSGRSRPPPQSL 374
           LPQ++   Q  P  G     + G+ +PLASLR + G        P      R  P P  L
Sbjct: 86  LPQYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQG--------PRGEPGPRGPPGPPGL 137

Query: 375 ----LQTRPERASGSGGPGRGLQVPPGSPPGAAPLARPGRSGEGRRDTEARGPVG 425
               +     +    G PG G    PG P     +  PG  GE  +  E  GP+G
Sbjct: 138 PGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEI-GPMG 191


>gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 365

 Score = 36.6 bits (83), Expect = 0.045
 Identities = 40/152 (26%), Positives = 52/152 (34%), Gaps = 6/152 (3%)

Query: 283 DGYSGDRGAALQLDQAAAFWVTGEFTVWSAAQRLP-QHLSSAQVTPAGAARQHQLGEAVP 341
           D   G RGA L+LD     W  G+         LP Q     QV       QH+ G+   
Sbjct: 200 DASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQRQVEQLQHRHQHERGQQQL 259

Query: 342 LASLRRDSGILRLLEDAPHVAGSGRSRPPPQSLLQTRPERASGSGGPGRGLQ--VPPGSP 399
           +       G L     +   A + R +  P +     P+ A  S G  R  +   PP  P
Sbjct: 260 VEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPP 319

Query: 400 PGA---APLARPGRSGEGRRDTEARGPVGGRR 428
           P A    P   PG      R   + GP    R
Sbjct: 320 PAARRPPPPPAPGAPARPLRGRRSHGPAARPR 351


>gi|223941923 OTU domain containing 1 [Homo sapiens]
          Length = 481

 Score = 36.2 bits (82), Expect = 0.059
 Identities = 47/193 (24%), Positives = 66/193 (34%), Gaps = 16/193 (8%)

Query: 242 CVPLLSLGGRKAAGTCKAEMLAGRLIYPGTLEAICSFEKACDGYSGDRGAALQLDQAAAF 301
           C P  +   R+AA    A+M A    +    E +          +G  GA+ +      +
Sbjct: 53  CQPAAAAEHREAAAVPAAKMPA----FSSCFEVVSGAAAPASAAAGPPGASCKPPLPPHY 108

Query: 302 WVTGEFTVWS-AAQRLPQH-------LSSAQVTPAGAARQHQLGEAVPLASLRRDSGILR 353
             T + TV +  A RL  H        + +   P G         A P+   R  S  L 
Sbjct: 109 TSTAQITVRALGADRLLLHGPDPVPGAAGSAAAPRGRCLLLAPAPAAPVPPRRGSSAWLL 168

Query: 354 ---LLEDAPHVAGSGRSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSP-PGAAPLARPG 409
              L  D P  AG   +R  P    +    R + +    RG    PGSP PG  P     
Sbjct: 169 EELLRPDCPEPAGLDATREGPDRNFRLSEHRQALAAAKHRGPAATPGSPDPGPGPWGEEH 228

Query: 410 RSGEGRRDTEARG 422
            +  G R  E  G
Sbjct: 229 LAERGPRGWERGG 241


>gi|239755585 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 350

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 35/127 (27%), Positives = 47/127 (37%), Gaps = 3/127 (2%)

Query: 283 DGYSGDRGAALQLDQAAAFWVTGEFTVWSAAQRLP-QHLSSAQVTPAGAARQHQLGEAVP 341
           D   G RGA L+LD     W  G+         LP Q     QV       QH+ G+   
Sbjct: 200 DASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQRQVEQLQHRHQHERGQQQL 259

Query: 342 LASLRRDSGILRLLEDAPHVAGSGRSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSPPG 401
           +       G L     +   A + R +  P +     P+ A  S G  R  +  P +PP 
Sbjct: 260 VEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAE--PRAPPR 317

Query: 402 AAPLARP 408
             P ARP
Sbjct: 318 PPPAARP 324


>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
          Length = 841

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 358 APHVAGSGRSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSPPG--AAPLARPGRSGEGR 415
           A  ++   ++RP   S    RP     S GPG  L   P SP G  A+P  R  R  E +
Sbjct: 456 ASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRVRRKEEAK 515

Query: 416 RDTEARGP 423
               A GP
Sbjct: 516 ESPSAAGP 523


>gi|20270245 GLI-Kruppel family member GLI4 [Homo sapiens]
          Length = 376

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 372 QSLLQTRPERA--SGSGGPGRGLQVPPGSPPGAAPLARP 408
           +SLL++ P RA  S   GP    + P G PPGA P A+P
Sbjct: 101 RSLLRSLPRRARCSAGFGPESSAERPAGQPPGAVPCAQP 139


>gi|29029597 glutamate receptor KA2 precursor [Homo sapiens]
          Length = 980

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 9/70 (12%)

Query: 350 GILRLLEDAPHVAGSGRSRPPP-------QSLLQTRPERASGSGGPGRGLQVPPGSPPGA 402
           G  RLL+D    +G+  + P P       Q   + +  RASG+G P RGL VP  +   +
Sbjct: 905 GPQRLLDDPGPPSGARPAAPTPCTHVRVCQECRRIQALRASGAGAPPRGLGVP--AEATS 962

Query: 403 APLARPGRSG 412
            P  RPG +G
Sbjct: 963 PPRPRPGPAG 972


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 36/113 (31%), Positives = 45/113 (39%), Gaps = 16/113 (14%)

Query: 312 AAQRLPQHLSSAQVTPAGAARQHQLGEAVPLASLRRDSGILRLLEDAPHVA------GSG 365
           A   LPQ L S    P  A +Q     A P     R S  +     AP  A         
Sbjct: 500 AGSPLPQRLPS----PTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQ 555

Query: 366 RSRPPPQSLLQTR-----PERASGSGGPGRGLQVPPGSPPG-AAPLARPGRSG 412
           R   PPQ+  QT      P +ASG+   G+  Q PP  PPG A P  +  ++G
Sbjct: 556 RQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAG 608


>gi|19924097 synapsin I isoform Ib [Homo sapiens]
          Length = 669

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 36/113 (31%), Positives = 45/113 (39%), Gaps = 16/113 (14%)

Query: 312 AAQRLPQHLSSAQVTPAGAARQHQLGEAVPLASLRRDSGILRLLEDAPHVA------GSG 365
           A   LPQ L S    P  A +Q     A P     R S  +     AP  A         
Sbjct: 500 AGSPLPQRLPS----PTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQ 555

Query: 366 RSRPPPQSLLQTR-----PERASGSGGPGRGLQVPPGSPPG-AAPLARPGRSG 412
           R   PPQ+  QT      P +ASG+   G+  Q PP  PPG A P  +  ++G
Sbjct: 556 RQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAG 608


>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 274

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 40/114 (35%), Positives = 47/114 (41%), Gaps = 12/114 (10%)

Query: 318 QHLSSAQVTPAGAARQHQLGEAVPLASLRRDSGILR--LLEDAPHVAGSGRSRPPPQSLL 375
           Q L  A + P G+A + Q  E    A         R  L    P +    R RPPP    
Sbjct: 62  QTLQRASLLPGGSADKDQEREPSLAARGTAPPAPPRQCLPTPCPPLGHGLRPRPPPG--- 118

Query: 376 QTRPERASGSGGPG-RGLQVPPGSPPGAAPLARPGRSGEGRRDTEARGPVGGRR 428
            T P R   +  PG RGL   P  PP  AP AR G +G+   D    GP  GRR
Sbjct: 119 -TPPPRCPRTLAPGPRGLF--PAPPP--AP-ARTGPAGKAAADRGRPGPAAGRR 166


>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
           sapiens]
          Length = 258

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 8/48 (16%)

Query: 369 PPPQSLLQT---RPERASGSGGPGRGLQVPPGSPPGAAPLARPGRSGE 413
           PPP +L+Q    +P R    G PG     PPG P    P+  PG  GE
Sbjct: 59  PPPSTLVQGPQGKPGRTGKPGPPG-----PPGDPGPPGPVGPPGEKGE 101


>gi|155029552 hypothetical protein LOC388115 [Homo sapiens]
          Length = 534

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 379 PERASGSGGPGRGLQVPPGSPPGAAPLARPGRSGEGRRDTEARGPVGGRRR 429
           P+R +G   PG       G+  G AP +RP R G  R    +RG  G RRR
Sbjct: 478 PQRGAGLPEPGEDRSGKSGAQQGLAPRSRPTRGGSQR----SRGTAGVRRR 524


>gi|58331144 proline rich region 18 [Homo sapiens]
          Length = 295

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 8/66 (12%)

Query: 353 RLLEDAPHVAGSGRSRPP--PQSLLQTR-----PERASGSGGPGRGLQVPPGSPPGAAPL 405
           R L   P  AG  + RPP  P+ LL +       +R     GPG     PP +PPG +P 
Sbjct: 20  RQLPRRPCAAGDKKKRPPQRPEGLLSSSWPSATLKRPPARRGPGLDRTQPP-APPGVSPQ 78

Query: 406 ARPGRS 411
           A P R+
Sbjct: 79  ALPSRA 84



 Score = 29.3 bits (64), Expect = 7.2
 Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 13/47 (27%)

Query: 357 DAPHVAGSGRSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSP-PGA 402
           DAP  AG GR  PPP + L               GLQVP  SP PGA
Sbjct: 196 DAPPTAGQGRRAPPPGAQLL------------HGGLQVPQLSPRPGA 230


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
          Length = 2161

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 47/201 (23%), Positives = 67/201 (33%), Gaps = 24/201 (11%)

Query: 213  PPRAPLGADKRRETVSTRGWASWGLLFSPCVPLLSLGGRKAAGTCKAEMLAGRLIYPGTL 272
            PPR  LG        S RGW   G   +P  P  S  G    G   ++  A R       
Sbjct: 1036 PPRLALGPQP-----SLRGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPALRYFQLPPR 1090

Query: 273  EAICSFEKACDGYSGDRGAALQLDQAAAFWVTGEFTVWSAAQRLPQHLSSAQVTPAGAAR 332
             A  +         G +G  ++  +     V GE          P   S A   P  A  
Sbjct: 1091 AASAAMYVPARSGRGRKGPLVKQTK-----VEGEPQKGGGLPPAPSPTSPASPQPPPAVA 1145

Query: 333  QHQLGEAVPLASLRRDSGILRLLEDAPHVAGSGRSRPPPQSLLQ--TRPERASGSGGPGR 390
                  ++P+ ++         +  AP  + SGRS     +  +  T+PE   G GG G 
Sbjct: 1146 APSEKNSIPIPTI---------IIKAPSTSSSGRSSQGSSTEAEPPTQPEPTGGGGGGGS 1196

Query: 391  GLQVPPGS---PPGAAPLARP 408
                 P     PP  +P+  P
Sbjct: 1197 SPSPAPAMSPVPPSPSPVPTP 1217


>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
           sapiens]
          Length = 1487

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 31/78 (39%), Positives = 37/78 (47%), Gaps = 11/78 (14%)

Query: 358 APHVAGSGR---SRPPPQSLLQTRPERASG-SGGPG----RGLQVPPGSPPGAAPLARPG 409
           AP +AG+      R PP     T P    G +G PG    +G Q P G P  A P   PG
Sbjct: 424 APGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPG 483

Query: 410 RSG-EGRRDTEARGPVGG 426
            +G EG+R   ARG  GG
Sbjct: 484 PAGEEGKRG--ARGEPGG 499



 Score = 29.3 bits (64), Expect = 7.2
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 8/43 (18%)

Query: 383 SGSGGPGRGLQVPPGSPPGAAPLARPGRSGEGRRDTEARGPVG 425
           SG  GP RG   PPG P       +PG++GE       RGP G
Sbjct: 236 SGPMGP-RGPPGPPGKPGDDGEAGKPGKAGE-------RGPPG 270



 Score = 28.9 bits (63), Expect = 9.4
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 9/40 (22%)

Query: 386  GGPGRGLQVPPGSPPGAAPLARPGRSGEGRRDTEARGPVG 425
            G PG     PPGSP  A P  + G  GE      A+GP+G
Sbjct: 1068 GAPG-----PPGSPGPAGPTGKQGDRGE----AGAQGPMG 1098


>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
           sapiens]
          Length = 1418

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 31/78 (39%), Positives = 37/78 (47%), Gaps = 11/78 (14%)

Query: 358 APHVAGSGR---SRPPPQSLLQTRPERASG-SGGPG----RGLQVPPGSPPGAAPLARPG 409
           AP +AG+      R PP     T P    G +G PG    +G Q P G P  A P   PG
Sbjct: 355 APGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPG 414

Query: 410 RSG-EGRRDTEARGPVGG 426
            +G EG+R   ARG  GG
Sbjct: 415 PAGEEGKRG--ARGEPGG 430



 Score = 29.3 bits (64), Expect = 7.2
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 8/43 (18%)

Query: 383 SGSGGPGRGLQVPPGSPPGAAPLARPGRSGEGRRDTEARGPVG 425
           SG  GP RG   PPG P       +PG++GE       RGP G
Sbjct: 167 SGPMGP-RGPPGPPGKPGDDGEAGKPGKAGE-------RGPPG 201



 Score = 28.9 bits (63), Expect = 9.4
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 9/40 (22%)

Query: 386  GGPGRGLQVPPGSPPGAAPLARPGRSGEGRRDTEARGPVG 425
            G PG     PPGSP  A P  + G  GE      A+GP+G
Sbjct: 999  GAPG-----PPGSPGPAGPTGKQGDRGE----AGAQGPMG 1029


>gi|5901944 elastin microfibril interfacer 1 [Homo sapiens]
          Length = 1016

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 46/160 (28%), Positives = 56/160 (35%), Gaps = 27/160 (16%)

Query: 250 GRKAAGTCKAEMLAGRLIYPGTLEAICS-FEKACDGYSGDRGAALQLDQAAAFWVTGEFT 308
           G+  AG C +  L GRL   G LE +C   +    G  G R    +    A  W      
Sbjct: 713 GQAQAGQCPS--LEGRL---GRLEGVCERLDTVAGGLQGLREGLSR--HVAGLW------ 759

Query: 309 VWSAAQRLPQHLSSAQVTPAGAARQHQLGEAVPLASLRRDSGILRLLEDAPH-------V 361
              A  R     S  Q          Q G    L +L      L+LLED  H        
Sbjct: 760 ---AGLRETNTTSQMQAALLEKLVGGQAGLGRRLGALNSS---LQLLEDRLHQLSLKDLT 813

Query: 362 AGSGRSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSPPG 401
             +G + PP    LQ  P  A   G PG+  Q  P  PPG
Sbjct: 814 GPAGEAGPPGPPGLQGPPGPAGPPGSPGKDGQEGPIGPPG 853


>gi|150417999 ubiquitin-conjugating enzyme E2Z [Homo sapiens]
          Length = 354

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 361 VAGSGRSRPPP-QSLLQTRPERASGSGGPGRGLQVPPGSPPGAA 403
           V+GSG    PP    +      A G+GGPG GL   PG PP AA
Sbjct: 30  VSGSGGGFGPPFLPDVWAAAAAAGGAGGPGSGLAPLPGLPPSAA 73


>gi|194272183 G protein-coupled receptor 124 [Homo sapiens]
          Length = 1338

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 313  AQRLPQHLSSAQVTPAGAARQHQLGEAVPLASLRR-DSGILRLLEDAPHVAGSGRSRPPP 371
            A R P ++   +      A+ H+ GEA     L+    G    LE     +GS  + P  
Sbjct: 1169 AHRHPNNVHHGRRAHKSRAKGHRAGEACGKNRLKALRGGAAGALELLSSESGSLHNSPTD 1228

Query: 372  QSLLQTRPERASGSGGPGRGLQVPP-GSPPGAAPLARPGRSGEGR 415
              L  +R    +G    G  +  P  GS   AAPL+  GR+G+ R
Sbjct: 1229 SYLGSSRNSPGAGLQLEGEPMLTPSEGSDTSAAPLSEAGRAGQRR 1273


>gi|7706501 WW domain binding protein 11 [Homo sapiens]
          Length = 641

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 21/96 (21%)

Query: 313 AQRLPQHLSSAQVTPAGAARQHQLGEAVPLASLRRDSGILRLLEDAPHVAGSGRSRPPPQ 372
           +Q+  +  S +  T   +++Q    ++VP + ++           AP + G     PPP 
Sbjct: 370 SQKQHKEESHSDGTSTASSQQQAPPQSVPPSQIQ-----------APPMPGPPPLGPPPA 418

Query: 373 SLLQTRPERASGSGGPGRGLQVPPGSPPGAAPLARP 408
             L  RP       GP  GL  PPG PPGA P  RP
Sbjct: 419 PPL--RPP------GPPTGL--PPGPPPGAPPFLRP 444



 Score = 30.4 bits (67), Expect = 3.2
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 369 PPPQSLLQTRPERASGSGGPGRGLQVPPGSPPGAAPLARPG 409
           PPP +    RP    G  GP   L +PPG PPG  P   PG
Sbjct: 434 PPPGAPPFLRPPGMPGLRGPLPRL-LPPGPPPGRPPGPPPG 473


>gi|45439357 elongin A2 [Homo sapiens]
          Length = 753

 Score = 33.5 bits (75), Expect = 0.38
 Identities = 39/128 (30%), Positives = 48/128 (37%), Gaps = 17/128 (13%)

Query: 290 GAALQLDQAAAFWVTGEFTVWSAAQRLPQHLSSAQVTPAGAARQHQLGEAVPLASLRRDS 349
           G ALQ DQ  A+      T   +    P+H  +A+ TP G  R H      P +  R   
Sbjct: 100 GEALQ-DQEKAWGFPENATAPRSPSHSPEHRRTARRTPPGQQRPH------PRSHSREPR 152

Query: 350 GILRLLEDAPHVAGSGRSRPPPQSLLQTR----PERASGSGGPGRGLQVPPGSPPGAAPL 405
              +    AP  A SGR R  P      R    PE A+    PGRG            PL
Sbjct: 153 AERKCPRIAP--ADSGRYRASPTRTAPLRMPEGPEPAAPGKQPGRG----HTHAAQGGPL 206

Query: 406 ARPGRSGE 413
             PG  G+
Sbjct: 207 LCPGCQGQ 214


>gi|239754301 PREDICTED: hypothetical protein XP_002345934 [Homo
           sapiens]
          Length = 221

 Score = 33.1 bits (74), Expect = 0.50
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 365 GRSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSPPGAAPLARPG 409
           G +  PP   L+    R  G GGP +G + P  +P G+AP   PG
Sbjct: 90  GSTESPPARTLR----RGEGRGGPAQGARGPTPTPRGSAPPRPPG 130


>gi|169167740 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 302

 Score = 33.1 bits (74), Expect = 0.50
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 366 RSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSP-PGAAPLARP---GRSGEGRR 416
           RSR PP+      PER+    G G   + P   P PG  P+ RP   GRSG G R
Sbjct: 164 RSRGPPRQARSQHPERSPEPEGRGNHARKPAALPVPGRFPI-RPVLGGRSGPGDR 217


>gi|239748840 PREDICTED: hypothetical protein XP_002346835 [Homo
           sapiens]
          Length = 221

 Score = 33.1 bits (74), Expect = 0.50
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 365 GRSRPPPQSLLQTRPERASGSGGPGRGLQVPPGSPPGAAPLARPG 409
           G +  PP   L+    R  G GGP +G + P  +P G+AP   PG
Sbjct: 90  GSTESPPARTLR----RGEGRGGPAQGARGPTPTPRGSAPPRPPG 130


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,278,951
Number of Sequences: 37866
Number of extensions: 1074988
Number of successful extensions: 7120
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 339
Number of HSP's that attempted gapping in prelim test: 6291
Number of HSP's gapped (non-prelim): 1179
length of query: 429
length of database: 18,247,518
effective HSP length: 105
effective length of query: 324
effective length of database: 14,271,588
effective search space: 4623994512
effective search space used: 4623994512
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.