Guide to the Human Genome
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Name: LOC100128074 Sequence: fasta or formatted (350aa) NCBI GI: 239755585
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {381aa} PREDICTED: hypothetical protein
alt prot {365aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         36           3
 C cysteine            2.9         10           1
 D aspartate           2.6          9           1
 E glutamate           5.4         19           1
 F phenylalanine       0.6          2           1
 G glycine            12.3         43           2
 H histidine           6.3         22           1
 I isoleucine          1.4          5           1
 K lysine              1.4          5           1
 L leucine            10.6         37           4
 M methionine          0.6          2           1
 N asparagine          0.9          3           1
 P proline            12.3         43           4
 Q glutamine           8.9         31           3
 R arginine            8.0         28           1
 S serine              4.0         14           1
 T threonine           2.6          9           3
 V valine              8.0         28           2
 W tryptophan          0.6          2           1
 Y tyrosine            0.6          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100128074          0.977   PREDICTED: hypothetical protein 
LOC100128074          0.914   PREDICTED: hypothetical protein 
PRB3                  0.023   proline-rich protein BstNI subfamily 3 precursor [H...
HCN2                  0.021   hyperpolarization activated cyclic nucleotide-gated...
LOC100290263          0.021   PREDICTED: hypothetical protein XP_002347916 
LOC100293662          0.020   PREDICTED: hypothetical protein 
LOC100291482          0.020   PREDICTED: hypothetical protein XP_002347725 
LOC100289444          0.020   PREDICTED: hypothetical protein 
LOC100289444          0.020   PREDICTED: hypothetical protein XP_002342754 
LOC100289444          0.020   PREDICTED: hypothetical protein 
REPIN1                0.020   replication initiator 1 isoform 1 
REPIN1                0.020   replication initiator 1 isoform 1 
REPIN1                0.020   replication initiator 1 isoform 3 
REPIN1                0.020   replication initiator 1 isoform 1 
PRR12                 0.020   proline rich 12 
CDT1                  0.018   chromatin licensing and DNA replication factor 1 [H...
ZNF219                0.018   zinc finger protein 219 
ZNF219                0.018   zinc finger protein 219 
ATXN2L                0.018   ataxin 2 related protein isoform B 
ATXN2L                0.018   ataxin 2 related protein isoform E 
ATXN2L                0.018   ataxin 2 related protein isoform C 
ZNF219                0.018   zinc finger protein 219 
ATXN2L                0.018   ataxin 2 related protein isoform A 
ATXN2L                0.018   ataxin 2 related protein isoform D 
FMN1                  0.017   formin 1 
LOC100286967          0.017   PREDICTED: hypothetical protein XP_002342247 
C19orf61              0.017   hypothetical protein LOC56006 
NAT6                  0.017   N-acetyltransferase 6 
RPRD2                 0.017   Regulation of nuclear pre-mRNA domain containing 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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