| Name: LOC100290255 | Sequence: fasta or formatted (221aa) | NCBI GI: 239748840 | |
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Description: PREDICTED: hypothetical protein XP_002346835
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 11.3 25 3 C cysteine 1.8 4 1 D aspartate 1.8 4 1 E glutamate 4.1 9 1 F phenylalanine 1.4 3 1 G glycine 15.4 34 3 H histidine 5.9 13 2 I isoleucine 2.3 5 1 K lysine 0.9 2 1 L leucine 10.9 24 2 M methionine 0.9 2 1 N asparagine 0.0 0 0 P proline 13.6 30 2 Q glutamine 3.2 7 1 R arginine 8.1 18 2 S serine 6.3 14 2 T threonine 3.2 7 1 V valine 7.7 17 3 W tryptophan 1.4 3 1 Y tyrosine 0.0 0 0 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002346835 LOC100287733 1.000 PREDICTED: hypothetical protein XP_002342667 LOC100291554 0.993 PREDICTED: hypothetical protein XP_002345934 LOC100130360 0.039 PREDICTED: hypothetical protein PRB1 0.039 proline-rich protein BstNI subfamily 1 isoform 1 pre... PRB2 0.036 proline-rich protein BstNI subfamily 2 COL18A1 0.036 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.036 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.036 alpha 1 type XVIII collagen isoform 1 precursor [Ho... TENC1 0.034 tensin like C1 domain containing phosphatase isoform... TENC1 0.034 tensin like C1 domain containing phosphatase isoform... TENC1 0.034 tensin like C1 domain containing phosphatase isoform... FMNL1 0.034 formin-like 1 LOC440829 0.032 PREDICTED: transmembrane protein 46-like LOC440829 0.032 PREDICTED: transmembrane protein 46-like MNT 0.032 MAX binding protein SYNPO 0.032 synaptopodin isoform A PPRC1 0.032 peroxisome proliferator-activated receptor gamma, co... WAS 0.030 Wiskott-Aldrich syndrome protein CPSF6 0.030 cleavage and polyadenylation specific factor 6, 68 ... FLJ39639 0.030 PREDICTED: hypothetical protein FLJ39639 FLJ39639 0.030 PREDICTED: hypothetical protein FLJ39639 FLJ39639 0.030 PREDICTED: hypothetical protein LOC283876 C6orf174 0.030 hypothetical protein LOC387104 COL5A1 0.027 alpha 1 type V collagen preproprotein SCAF1 0.027 SR-related CTD-associated factor 1 MYPOP 0.027 Myb protein P42POP ADAM8 0.027 ADAM metallopeptidase domain 8 precursor SEC24D 0.027 Sec24-related protein D COL12A1 0.027 collagen, type XII, alpha 1 short isoform precursor ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
