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Search of human proteins with 239752574
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752574 PREDICTED: hypothetical protein XP_002348296 [Homo
sapiens]
(164 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752574 PREDICTED: hypothetical protein XP_002348296 [Homo ... 340 2e-94
gi|239757983 PREDICTED: similar to protein-L-isoaspartate (D-asp... 233 4e-62
gi|239747889 PREDICTED: hypothetical protein XP_002346467 [Homo ... 233 4e-62
gi|239758102 PREDICTED: similar to protein-L-isoaspartate (D-asp... 231 2e-61
gi|190360566 protein-L-isoaspartate (D-aspartate) O-methyltransf... 229 1e-60
gi|239756570 PREDICTED: similar to protein-L-isoaspartate (D-asp... 218 2e-57
gi|239752577 PREDICTED: hypothetical protein XP_002348294 [Homo ... 218 2e-57
gi|239745549 PREDICTED: hypothetical protein XP_002343514 [Homo ... 218 2e-57
gi|157388997 protein-L-isoaspartate (D-aspartate) O-methyltransf... 88 3e-18
gi|157388995 protein-L-isoaspartate (D-aspartate) O-methyltransf... 88 3e-18
gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens] 40 0.001
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 39 0.003
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 39 0.003
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 37 0.008
gi|118600967 shroom family member 4 [Homo sapiens] 37 0.010
gi|115511012 coiled-coil domain containing 136 [Homo sapiens] 37 0.010
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap... 36 0.013
gi|56676330 HP1-BP74 [Homo sapiens] 36 0.017
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 35 0.029
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 35 0.029
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 35 0.038
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 35 0.038
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 34 0.050
gi|56118310 nuclear casein kinase and cyclin-dependent kinase su... 34 0.065
gi|5454156 ubiquitin specific protease 16 isoform a [Homo sapiens] 33 0.085
gi|75992941 ubiquitin specific protease 16 isoform a [Homo sapiens] 33 0.085
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 33 0.085
gi|55741677 SET domain containing 1A [Homo sapiens] 33 0.085
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 33 0.085
gi|209862789 microtubule associated monoxygenase, calponin and L... 33 0.085
>gi|239752574 PREDICTED: hypothetical protein XP_002348296 [Homo
sapiens]
Length = 164
Score = 340 bits (873), Expect = 2e-94
Identities = 164/164 (100%), Positives = 164/164 (100%)
Query: 1 MTPPVALIKTHQLHPFMNMHEHPRALGNPPSEGPRNHRHRALCGVTVRNLQDLARIYIRC 60
MTPPVALIKTHQLHPFMNMHEHPRALGNPPSEGPRNHRHRALCGVTVRNLQDLARIYIRC
Sbjct: 1 MTPPVALIKTHQLHPFMNMHEHPRALGNPPSEGPRNHRHRALCGVTVRNLQDLARIYIRC 60
Query: 61 TLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNK 120
TLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNK
Sbjct: 61 TLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNK 120
Query: 121 EEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 164
EEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK
Sbjct: 121 EEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 164
>gi|239757983 PREDICTED: similar to protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 1
[Homo sapiens]
Length = 132
Score = 233 bits (595), Expect = 4e-62
Identities = 121/146 (82%), Positives = 122/146 (83%), Gaps = 14/146 (9%)
Query: 19 MHEHPRALGNPPSEGPRNHRHRALCGVTVRNLQDLARIYIRCTLRNFINDEMQAKGIPQR 78
M EHPRALG PPS VRNLQDLA IYIR TLR F NDEMQAKGIPQR
Sbjct: 1 MREHPRALGIPPS--------------AVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQR 46
Query: 79 APPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQ 138
APPKRKRKR KQRITTYVFVGNQLIPQPLDSEEDE+MEEDNKEEEEKDHSEAMKPEEPPQ
Sbjct: 47 APPKRKRKRAKQRITTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQ 106
Query: 139 NLLTEKIMKLTLPESLKAYLTYFRDK 164
NLL EKIMKL LPESLKAYLTYFRDK
Sbjct: 107 NLLREKIMKLPLPESLKAYLTYFRDK 132
>gi|239747889 PREDICTED: hypothetical protein XP_002346467 [Homo
sapiens]
Length = 132
Score = 233 bits (595), Expect = 4e-62
Identities = 121/146 (82%), Positives = 122/146 (83%), Gaps = 14/146 (9%)
Query: 19 MHEHPRALGNPPSEGPRNHRHRALCGVTVRNLQDLARIYIRCTLRNFINDEMQAKGIPQR 78
M EHPRALG PPS VRNLQDLA IYIR TLR F NDEMQAKGIPQR
Sbjct: 1 MREHPRALGIPPS--------------AVRNLQDLALIYIRRTLRKFTNDEMQAKGIPQR 46
Query: 79 APPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQ 138
APPKRKRKR KQRITTYVFVGNQLIPQPLDSEEDE+MEEDNKEEEEKDHSEAMKPEEPPQ
Sbjct: 47 APPKRKRKRAKQRITTYVFVGNQLIPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQ 106
Query: 139 NLLTEKIMKLTLPESLKAYLTYFRDK 164
NLL EKIMKL LPESLKAYLTYFRDK
Sbjct: 107 NLLREKIMKLPLPESLKAYLTYFRDK 132
>gi|239758102 PREDICTED: similar to protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 1
[Homo sapiens]
Length = 118
Score = 231 bits (590), Expect = 2e-61
Identities = 115/116 (99%), Positives = 115/116 (99%)
Query: 49 NLQDLARIYIRCTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLD 108
NLQDLARIYIR TLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLD
Sbjct: 3 NLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLD 62
Query: 109 SEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 164
SEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK
Sbjct: 63 SEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 118
>gi|190360566 protein-L-isoaspartate (D-aspartate)
O-methyltransferase domain containing 1 [Homo sapiens]
Length = 357
Score = 229 bits (583), Expect = 1e-60
Identities = 119/152 (78%), Positives = 124/152 (81%), Gaps = 14/152 (9%)
Query: 13 LHPFMNMHEHPRALGNPPSEGPRNHRHRALCGVTVRNLQDLARIYIRCTLRNFINDEMQA 72
+ P N + P ++G PP VRNLQDLARIYIR TLRNFINDEMQA
Sbjct: 220 VQPSKNDNGKPDSVGLPPC--------------AVRNLQDLARIYIRRTLRNFINDEMQA 265
Query: 73 KGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMK 132
KGIPQRAPPKRKRKRVKQRI TYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDH+EAMK
Sbjct: 266 KGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHNEAMK 325
Query: 133 PEEPPQNLLTEKIMKLTLPESLKAYLTYFRDK 164
PEEPPQNLL EKIMKL LPESLKAYLTYFRDK
Sbjct: 326 PEEPPQNLLREKIMKLPLPESLKAYLTYFRDK 357
>gi|239756570 PREDICTED: similar to protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 1
[Homo sapiens]
Length = 150
Score = 218 bits (555), Expect = 2e-57
Identities = 111/121 (91%), Positives = 113/121 (93%)
Query: 44 GVTVRNLQDLARIYIRCTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLI 103
G+TVRNLQDLA IYIR TLRNFINDEMQAKGIPQRAPPKRKRKRVKQRIT YV V NQLI
Sbjct: 30 GITVRNLQDLALIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITIYVCVCNQLI 89
Query: 104 PQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRD 163
QPLDSEEDE+MEEDNKEEEEKDHSEAMKPEEPPQ LLTEKIMKL LPESLKAYLTYFRD
Sbjct: 90 LQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQYLLTEKIMKLPLPESLKAYLTYFRD 149
Query: 164 K 164
K
Sbjct: 150 K 150
>gi|239752577 PREDICTED: hypothetical protein XP_002348294 [Homo
sapiens]
Length = 150
Score = 218 bits (555), Expect = 2e-57
Identities = 111/121 (91%), Positives = 113/121 (93%)
Query: 44 GVTVRNLQDLARIYIRCTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLI 103
G+TVRNLQDLA IYIR TLRNFINDEMQAKGIPQRAPPKRKRKRVKQRIT YV V NQLI
Sbjct: 30 GITVRNLQDLALIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITIYVCVCNQLI 89
Query: 104 PQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRD 163
QPLDSEEDE+MEEDNKEEEEKDHSEAMKPEEPPQ LLTEKIMKL LPESLKAYLTYFRD
Sbjct: 90 LQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQYLLTEKIMKLPLPESLKAYLTYFRD 149
Query: 164 K 164
K
Sbjct: 150 K 150
>gi|239745549 PREDICTED: hypothetical protein XP_002343514 [Homo
sapiens]
Length = 150
Score = 218 bits (555), Expect = 2e-57
Identities = 111/121 (91%), Positives = 113/121 (93%)
Query: 44 GVTVRNLQDLARIYIRCTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLI 103
G+TVRNLQDLA IYIR TLRNFINDEMQAKGIPQRAPPKRKRKRVKQRIT YV V NQLI
Sbjct: 30 GITVRNLQDLALIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRITIYVCVCNQLI 89
Query: 104 PQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFRD 163
QPLDSEEDE+MEEDNKEEEEKDHSEAMKPEEPPQ LLTEKIMKL LPESLKAYLTYFRD
Sbjct: 90 LQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQYLLTEKIMKLPLPESLKAYLTYFRD 149
Query: 164 K 164
K
Sbjct: 150 K 150
>gi|157388997 protein-L-isoaspartate (D-aspartate)
O-methyltransferase domain containing 2 isoform 2 [Homo
sapiens]
Length = 334
Score = 88.2 bits (217), Expect = 3e-18
Identities = 55/126 (43%), Positives = 79/126 (62%), Gaps = 8/126 (6%)
Query: 45 VTVRNLQDLARIYIRCTLRNFINDEMQAK-GIPQRAPPKRKRKRVKQR-ITTYVFVGNQL 102
V VR+LQDLARI IR T++ I+ E +K G + P+ KR+RV++R + T VF+ ++
Sbjct: 211 VAVRSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEV 270
Query: 103 ----IPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYL 158
I P D E +EE+ +EEEEK E KP+ PP N L +K++ L LP+ LK YL
Sbjct: 271 FASRISNPSDDNSCEDLEEERREEEEKTPPET-KPD-PPVNFLRQKVLSLPLPDPLKYYL 328
Query: 159 TYFRDK 164
Y+R+K
Sbjct: 329 LYYREK 334
>gi|157388995 protein-L-isoaspartate (D-aspartate)
O-methyltransferase domain containing 2 isoform 1 [Homo
sapiens]
Length = 361
Score = 88.2 bits (217), Expect = 3e-18
Identities = 55/126 (43%), Positives = 79/126 (62%), Gaps = 8/126 (6%)
Query: 45 VTVRNLQDLARIYIRCTLRNFINDEMQAK-GIPQRAPPKRKRKRVKQR-ITTYVFVGNQL 102
V VR+LQDLARI IR T++ I+ E +K G + P+ KR+RV++R + T VF+ ++
Sbjct: 238 VAVRSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEV 297
Query: 103 ----IPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYL 158
I P D E +EE+ +EEEEK E KP+ PP N L +K++ L LP+ LK YL
Sbjct: 298 FASRISNPSDDNSCEDLEEERREEEEKTPPET-KPD-PPVNFLRQKVLSLPLPDPLKYYL 355
Query: 159 TYFRDK 164
Y+R+K
Sbjct: 356 LYYREK 361
>gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens]
Length = 224
Score = 40.0 bits (92), Expect = 0.001
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 106 PLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPE 152
P D EEDE+ EE+ +EEEE++ E + PP +++E+ ++ P+
Sbjct: 41 PDDDEEDEEEEEEEEEEEEEEEEEEEEEAPPPPRVVSEEHLRRYAPD 87
>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
sapiens]
Length = 5033
Score = 38.5 bits (88), Expect = 0.003
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKA----YLTYFRD 163
+ EEDE+ KE+EEK+ EA + E+ + L E ++++ LPES+K L YF D
Sbjct: 1891 EKEEDEEETAQEKEDEEKEEEEAAEGEK--EEGLEEGLLQMKLPESVKLQMCHLLEYFCD 1948
Query: 164 K 164
+
Sbjct: 1949 Q 1949
>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
sapiens]
Length = 5038
Score = 38.5 bits (88), Expect = 0.003
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKA----YLTYFRD 163
+ EEDE+ KE+EEK+ EA + E+ + L E ++++ LPES+K L YF D
Sbjct: 1891 EKEEDEEETAQEKEDEEKEEEEAAEGEK--EEGLEEGLLQMKLPESVKLQMCHLLEYFCD 1948
Query: 164 K 164
+
Sbjct: 1949 Q 1949
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 37.0 bits (84), Expect = 0.008
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESL 154
+ EEDE+ EE+ +EEEE + E + EE + + +LT P+S+
Sbjct: 1073 EEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSV 1119
Score = 32.7 bits (73), Expect = 0.14
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 101 QLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEE 135
QL+ +S E+E+ EED +EEEE++ E + EE
Sbjct: 1060 QLLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEE 1094
Score = 28.1 bits (61), Expect = 3.6
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 105 QPLDSEEDEKMEEDNKEEEEKDHSE 129
+P + EE+E+ EE+ +EEEE + E
Sbjct: 1349 KPEEEEEEEEEEEEEEEEEEGEEEE 1373
Score = 27.7 bits (60), Expect = 4.6
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 66 INDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEK 125
I +E++ G + +R+ ++ G + + EE+E+ EE+ +EEEE+
Sbjct: 1307 IEEEVKETGEALLPQEENRREETCAPVSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEE 1366
Query: 126 DHSE 129
+ E
Sbjct: 1367 EEGE 1370
Score = 27.7 bits (60), Expect = 4.6
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 10/55 (18%)
Query: 100 NQLIPQPLDSEEDEKMEEDNKEEE----------EKDHSEAMKPEEPPQNLLTEK 144
+ LI + EE+E+ EE+ +EEE EKD A E+ + TEK
Sbjct: 1345 DDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQEKEEPEISTEK 1399
>gi|118600967 shroom family member 4 [Homo sapiens]
Length = 1493
Score = 36.6 bits (83), Expect = 0.010
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 76 PQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEE 135
P R PP K R+ Q Q EE+E+ EE+ +EEEE++ EA + EE
Sbjct: 1101 PPRPPPPNWEK---YRLFRAAQQQKQQQQQQKQQEEEEEEEEEEEEEEEEEEEEAEEEEE 1157
Query: 136 --PPQNLLTE 143
PPQ +E
Sbjct: 1158 ELPPQYFSSE 1167
>gi|115511012 coiled-coil domain containing 136 [Homo sapiens]
Length = 1154
Score = 36.6 bits (83), Expect = 0.010
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 72 AKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLDSE-----EDEKMEEDNKEEEEKD 126
AK ++ + ++K+VK+ G++L+ +P D E ED++ E++KEEEEK+
Sbjct: 1034 AKEEEKKEEMEEEKKQVKEEAKEQC--GDELVAEPADPEEAKSTEDQEENEEDKEEEEKE 1091
Query: 127 HSEAMKPEEPPQNLLT-EKIMKLTLPESLKA 156
+ ++ +L + E+ L L ES K+
Sbjct: 1092 EDSEEEEDDADSSLESPEENNPLRLSESKKS 1122
Score = 28.1 bits (61), Expect = 3.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 99 GNQLIPQPLDSEEDEKMEEDNKEEEEK 125
G L+P + EE+E+ EE+ EEEE+
Sbjct: 6 GEVLLPALYEEEEEEEEEEEEVEEEEE 32
>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
sapiens]
Length = 528
Score = 36.2 bits (82), Expect = 0.013
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQ 138
+ EE+E+ EE +EEEE+D EA P PPQ
Sbjct: 316 EEEEEEEEEEAEEEEEEEDSEEAPPPLSPPQ 346
>gi|56676330 HP1-BP74 [Homo sapiens]
Length = 553
Score = 35.8 bits (81), Expect = 0.017
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 89 KQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKL 148
++ ++T N+ P E K E +N+E+EE SE K +E Q+ EK +K
Sbjct: 72 EESVSTVEEQENETPPATSSEAEQPKGEPENEEKEENKSSEETKKDEKDQSKEKEKKVKK 131
Query: 149 TLP 151
T+P
Sbjct: 132 TIP 134
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 35.0 bits (79), Expect = 0.029
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEE 135
D+EEDE+++ED +EEEE++ E + EE
Sbjct: 218 DAEEDEEVDEDGEEEEEEEEEEEEEEEE 245
Score = 30.8 bits (68), Expect = 0.55
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEE 135
D EEDE++EED +E+EE D + EE
Sbjct: 208 DVEEDEEVEEDAEEDEEVDEDGEEEEEE 235
Score = 30.4 bits (67), Expect = 0.72
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEK 144
D E DE EE+ +EEEE++ E + EE Q+ +K
Sbjct: 222 DEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQK 258
Score = 28.5 bits (62), Expect = 2.7
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEE 135
+ EE+E+ EE+ +EEEE + E + EE
Sbjct: 233 EEEEEEEEEEEEEEEEEYEQDERDQKEE 260
Score = 27.7 bits (60), Expect = 4.6
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQN 139
+ EE+E+ EE+ +EEEE+++ + + ++ N
Sbjct: 231 EEEEEEEEEEEEEEEEEEEYEQDERDQKEEGN 262
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 35.0 bits (79), Expect = 0.029
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEE 135
D+EEDE+++ED +EEEE++ E + EE
Sbjct: 218 DAEEDEEVDEDGEEEEEEEEEEEEEEEE 245
Score = 30.8 bits (68), Expect = 0.55
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEE 135
D EEDE++EED +E+EE D + EE
Sbjct: 208 DVEEDEEVEEDAEEDEEVDEDGEEEEEE 235
Score = 30.4 bits (67), Expect = 0.72
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEK 144
D E DE EE+ +EEEE++ E + EE Q+ +K
Sbjct: 222 DEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQK 258
Score = 28.5 bits (62), Expect = 2.7
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEE 135
+ EE+E+ EE+ +EEEE + E + EE
Sbjct: 233 EEEEEEEEEEEEEEEEEYEQDERDQKEE 260
Score = 27.7 bits (60), Expect = 4.6
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQN 139
+ EE+E+ EE+ +EEEE+++ + + ++ N
Sbjct: 231 EEEEEEEEEEEEEEEEEEEYEQDERDQKEEGN 262
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 34.7 bits (78), Expect = 0.038
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 107 LDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNL 140
L+ EE +K EE K+EE+K+ SE MK EE P +L
Sbjct: 230 LEDEETKKEEETPKQEEQKE-SEKMKSEEQPMDL 262
Score = 26.9 bits (58), Expect = 7.9
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 20/86 (23%)
Query: 62 LRNFINDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDE---KMEED 118
+ +++E + PQRA R++KR +R+ N LD EE E K+ +
Sbjct: 1063 ISTILDEERKENKRPQRAAAARRKKR--RRLNDLDSDSN------LDEEESEDEFKISDG 1114
Query: 119 NKEE-----EEKDHSEAMKPEEPPQN 139
+++E E D SE E+PP N
Sbjct: 1115 SQDEFVVSDENPDESE----EDPPSN 1136
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 34.7 bits (78), Expect = 0.038
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLL-TEKIMKLTLPESLKAYLTY 160
DSEE+E+ EE+ +EEEE++ E + EE + E+ + L PE+ + Y
Sbjct: 858 DSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQKQAIY 911
Score = 28.1 bits (61), Expect = 3.6
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLT 159
+ EE+++ EE+ +EEEE+ +E + P+ + I LP +LT
Sbjct: 873 EEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQKQAIYLFLLPIVFPLWLT 924
Score = 27.7 bits (60), Expect = 4.6
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 108 DSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEK 144
D + E+ EE+ +E+EE++ E + EE + EK
Sbjct: 855 DGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEK 891
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 34.3 bits (77), Expect = 0.050
Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 19/139 (13%)
Query: 23 PRALGNPPSEGPRNHRHRALCGVTVRNLQDLARIYIRCTLRNFINDEMQAKGIPQRAPPK 82
PRA+ P + P + H G+ R Q + ++ I E + P+R P +
Sbjct: 782 PRAI--PGDQHPESPVHTEPMGIQGRGRQTVDKVM-------GIPKETAERVGPERGPLE 832
Query: 83 RKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLT 142
R+ +++ T V +L D E+ + + D + +E + E+ PE ++L
Sbjct: 833 RETEKLLPERQTDVTGEEELTKGKQDREQKQLLARDTQRQESDKNGESASPERDRESLKV 892
Query: 143 E----------KIMKLTLP 151
E ++ K TLP
Sbjct: 893 EIETSEEIQEKQVQKQTLP 911
>gi|56118310 nuclear casein kinase and cyclin-dependent kinase
substrate 1 [Homo sapiens]
Length = 243
Score = 33.9 bits (76), Expect = 0.065
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 67 NDEMQAKGIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKD 126
N +M K P+R K + R+K +T G + +P S+ ++ KEE+E
Sbjct: 153 NKKMVKKSKPERKEKKMPKPRLKATVTPSPVKGKGKVGRPTASKASKEKTPSPKEEDE-- 210
Query: 127 HSEAMKPEEPPQ 138
+PE PP+
Sbjct: 211 -----EPESPPE 217
>gi|5454156 ubiquitin specific protease 16 isoform a [Homo sapiens]
Length = 823
Score = 33.5 bits (75), Expect = 0.085
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 6/42 (14%)
Query: 104 PQPLDSE------EDEKMEEDNKEEEEKDHSEAMKPEEPPQN 139
P+P + + E++K+E+++K E+E++ E M E PP N
Sbjct: 147 PKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMN 188
>gi|75992941 ubiquitin specific protease 16 isoform a [Homo sapiens]
Length = 823
Score = 33.5 bits (75), Expect = 0.085
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 6/42 (14%)
Query: 104 PQPLDSE------EDEKMEEDNKEEEEKDHSEAMKPEEPPQN 139
P+P + + E++K+E+++K E+E++ E M E PP N
Sbjct: 147 PKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMN 188
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 33.5 bits (75), Expect = 0.085
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 13/54 (24%)
Query: 82 KRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEE 135
KRKRKR K++ + + EE+E+ EE+ KEEEEK+ K ++
Sbjct: 61 KRKRKRKKKK-------------EEEEREEEEEEEEEEKEEEEKEEGRRRKKKK 101
Score = 28.5 bits (62), Expect = 2.7
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 82 KRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKM---------EEDNKEEEEKDHSEAMK 132
KRK KR ++R + + + EE+EK EE+ +EEEE++ E +
Sbjct: 28 KRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKE 87
Query: 133 PEEPPQNLLTEKIMK 147
EE + +K K
Sbjct: 88 EEEKEEGRRRKKKKK 102
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 33.5 bits (75), Expect = 0.085
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 74 GIPQRAPPKRKRKRVKQRITTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKP 133
G P PPKR +R K + G LDSE +E +E + E++E+D E +
Sbjct: 935 GRPGTKPPKRDEERGKTQ-------GKHRKSFALDSEGEEASQESSSEKDEEDDEEDEED 987
Query: 134 EEPPQNLLTEK 144
E+ + + T K
Sbjct: 988 EDREEAVDTTK 998
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 33.5 bits (75), Expect = 0.085
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 100 NQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPES 153
N L P + E +EE KEE E A+ PE NL+ E+I++L PES
Sbjct: 487 NMLEPS-ISLSEPLMLEEPEKEEIETSLPIAITPEPEDSNLVEEEIVELDYPES 539
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 33.5 bits (75), Expect = 0.085
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 109 SEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKA--YLTYFRDK 164
+EE+E+ EE+ +EEEE+D+ E + N +++M P ++A + T+ R++
Sbjct: 991 NEEEEEEEEEYEEEEEEDYDEEEEESSEAGNQRLQQVMHAADPLEIQADVHWTHIRER 1048
Score = 27.3 bits (59), Expect = 6.1
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 121 EEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESL--KAYLTYFRDK 164
++E+K E PE+P NLL E K P+SL + Y +DK
Sbjct: 1709 KKEKKSKGEGRPPEKPSSNLLEEAAAK---PKSLWKSVFSGYKKDK 1751
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,960,581
Number of Sequences: 37866
Number of extensions: 394007
Number of successful extensions: 8353
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 4773
Number of HSP's gapped (non-prelim): 2372
length of query: 164
length of database: 18,247,518
effective HSP length: 94
effective length of query: 70
effective length of database: 14,688,114
effective search space: 1028167980
effective search space used: 1028167980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.