Guide to the Human Genome
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Name: PCMTD2 Sequence: fasta or formatted (334aa) NCBI GI: 157388997
Description:

protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 isoform 2

Referenced in:

Additional Protein Modifications

Other entries for this name:
alt prot [361aa] protein-L-isoaspartate (D-aspartate) O-methyltransferase domain c...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         16           1
 C cysteine            2.1          7           1
 D aspartate           6.3         21           2
 E glutamate           9.9         33           4
 F phenylalanine       4.2         14           2
 G glycine             6.3         21           2
 H histidine           2.1          7           1
 I isoleucine          5.1         17           2
 K lysine              6.9         23           2
 L leucine            10.5         35           2
 M methionine          1.8          6           1
 N asparagine          4.2         14           1
 P proline             5.7         19           2
 Q glutamine           3.0         10           1
 R arginine            6.6         22           4
 S serine              6.9         23           2
 T threonine           3.0         10           1
 V valine              6.3         21           1
 W tryptophan          0.3          1           1
 Y tyrosine            4.2         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein-L-isoaspartate (D-aspartate) O-methyltransf... 
PCMTD2                0.977   protein-L-isoaspartate (D-aspartate) O-methyltransf...
PCMTD1                0.628   protein-L-isoaspartate (D-aspartate) O-methyltransf...
LOC100291612          0.110   PREDICTED: similar to protein-L-isoaspartate (D-asp...
LOC100290997          0.110   PREDICTED: hypothetical protein XP_002346467 
LOC100291082          0.096   PREDICTED: hypothetical protein XP_002348296 
LOC100291960          0.090   PREDICTED: similar to protein-L-isoaspartate (D-asp...
LOC100292459          0.086   PREDICTED: similar to protein-L-isoaspartate (D-asp...
LOC100290560          0.086   PREDICTED: hypothetical protein XP_002348294 
LOC100287647          0.086   PREDICTED: hypothetical protein XP_002343514 
PCMT1                 0.041   protein-L-isoaspartate (D-aspartate) O-methyltransf...
CHIC1                 0.020   cysteine-rich hydrophobic domain 1 
CHD9                  0.015   chromodomain helicase DNA binding protein 9 
NGEF                  0.014   neuronal guanine nucleotide exchange factor isoform...
NGEF                  0.014   neuronal guanine nucleotide exchange factor isoform...
KIAA1598              0.012   shootin1 isoform a 
KIAA1598              0.012   shootin1 isoform b 
TAOK2                 0.011   TAO kinase 2 isoform 1 
TAOK2                 0.011   TAO kinase 2 isoform 2 
TRMT61A               0.011   tRNA(m1A58)-methyltransferase subunit TRM61 
BAZ1A                 0.011   bromodomain adjacent to zinc finger domain, 1A isofo...
BAZ1A                 0.011   bromodomain adjacent to zinc finger domain, 1A isofo...
FBL                   0.009   fibrillarin 
NHSL2                 0.009   NHS-like 2 
WNT6                  0.009   wingless-type MMTV integration site family, member 6...
KIF21B                0.009   kinesin family member 21B 
GTF3C3                0.009   general transcription factor IIIC, polypeptide 3, 102...
CSRNP3                0.008   cysteine-serine-rich nuclear protein 3 
CNTLN                 0.008   centlein isoform 1 
DNAJC21               0.008   DnaJ homology subfamily A member 5 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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